RNA–Protein interactions for RNA: ENST00000589697.1

RAB8A-205, Transcript of RAB8A, member RAS oncogene family, human

TSL 1 (best)

Gene RAB8A, Length 1,754 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RAB8A-205	ENST00000589697	ABCA2	Q9BZC7	2435 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	CRYBG3	Q68DQ2	2970 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	SPG11	Q96JI7	2443 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	TRAV20	A0A0B4J274	112 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	TRAV40	A0A0B4J280	105 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	IGLC7	A0M8Q6	106 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	AGPAT2	O15120	278 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	HBE1	P02100	147 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	FAM106CP	P0CH98	169 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	TMEM11	P17152	192 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	GATA3	P23771	443 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	RAB2A	P61019	212 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	EBI3	Q14213	229 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	NARS2	Q96I59	477 aa	Known RBP	10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	RPRM	Q9NS64	109 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	USP9Y	O00507	2555 aa	Predicted RBP	10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	WNK2	Q9Y3S1	2297 aa		10.23	□□□□□ -0.77
RAB8A-205	ENST00000589697	FBN2	P35556	2912 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	IGHV1-69D	A0A0B4J2H0	117 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	BTBD17	A6NE02	478 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	IGHV1-69	P01742	117 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	RAB31	Q13636	194 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	C5orf64	Q2M2E5	130 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	FFAR4	Q5NUL3	377 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	TEPP	Q6URK8	271 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697		Q8N6K4	173 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	ZNF114	Q8NC26	417 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	RNASEH2C	Q8TDP1	164 aa	Known RBP	10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	SRSF12	Q8WXF0	261 aa	Known RBP	10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	C1orf159	Q96HA4	380 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	AJUBA	Q96IF1	538 aa		10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697	SRSF8	Q9BRL6	282 aa	Known RBP	10.22	□□□□□ -0.77
RAB8A-205	ENST00000589697		A0A096LNT2	108 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	CNIH1	O95406	144 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	ACSM6	Q6P461	480 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	PIP4P2	Q8N4L2	257 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	LINC01356	Q8N9X3	169 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	SFT2D1	Q8WV19	159 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	CACNG8	Q8WXS5	425 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	PSMG3-AS1	Q96PY0	264 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	P2RX4	Q99571	388 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	C7orf69	Q9H7B7	122 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	VSIR	Q9H7M9	311 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	HIF1AN	Q9NWT6	349 aa		10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	LSM4	Q9Y4Z0	139 aa	Known RBP	10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697	ASH1L	Q9NR48	2969 aa	Known RBP	10.21	□□□□□ -0.77
RAB8A-205	ENST00000589697		A0A1B0GV50	99 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	NCBP2L	A6PVI3	153 aa	Known RBP	10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	TEX22	C9J3V5	150 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	FCN1	O00602	326 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	REG1A	P05451	166 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	GPX4	P36969	197 aa	Predicted RBP	10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	OPRK1	P41145	380 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	SSBP2	P81877	361 aa	Predicted RBP	10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	CD69	Q07108	199 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	ACOT6	Q3I5F7	207 aa	Predicted RBP	10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697		Q5PR19	223 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	SLC16A13	Q7RTY0	426 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	CCDC28A	Q8IWP9	274 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	BPIFC	Q8NFQ6	507 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	RCC1L	Q96I51	464 aa	Known RBP	10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	SLC35E1	Q96K37	410 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	LINC00052	Q96N35	136 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	MGST2	Q99735	147 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	PBDC1	Q9BVG4	233 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	GGTLC1	Q9BX51	225 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	TREM1	Q9NP99	234 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	C1RL	Q9NZP8	487 aa		10.21	□□□□□ -0.78
RAB8A-205	ENST00000589697	TRAV1-1	A0A0B4J248	108 aa		10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	AREG	P15514	252 aa		10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	M6PR	P20645	277 aa		10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	LOXL1	Q08397	574 aa	Predicted RBP	10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	FBLN7	Q53RD9	439 aa		10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	RUSC1-AS1	Q66K80	236 aa		10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	TMEM144	Q7Z5S9	345 aa		10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	ABHD5	Q8WTS1	349 aa		10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	SSMEM1	Q8WWF3	244 aa		10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	MBD6	Q96DN6	1003 aa		10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	MED13L	Q71F56	2210 aa		10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	ANKRD17	O75179	2603 aa	Known RBP	10.2	□□□□□ -0.78
RAB8A-205	ENST00000589697	IGHV3OR16-10	A0A075B7F0	116 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	CORT	O00230	105 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	GAMT	Q14353	236 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	FXYD3	Q14802	87 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	SPSB3	Q6PJ21	355 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	OR10G4	Q8NGN3	311 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	OR10G9	Q8NGN4	311 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	OR10G7	Q8NGN6	311 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	OR1P1	Q8NH06	330 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	TMEM231	Q9H6L2	316 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	PXMP4	Q9Y6I8	212 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	TENM4	Q6N022	2769 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	MAP1LC3B2	A6NCE7	125 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	APELA	P0DMC3	54 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	SRSF3	P84103	164 aa	Known RBP	10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	ZNF726P1	Q15940	193 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	GUK1	Q16774	197 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	ETFRF1	Q6IPR1	90 aa		10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	RPP25L	Q8N5L8	163 aa	Known RBP	10.19	□□□□□ -0.78
RAB8A-205	ENST00000589697	MBD3L1	Q8WWY6	194 aa		10.19	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 114.9 ms