RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, human

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CNN1-208	ENST00000588935	RBKS	Q9H477	322 aa		11.36	□□□□□ -0.59
CNN1-208	ENST00000588935	GNB4	Q9HAV0	340 aa		11.36	□□□□□ -0.59
CNN1-208	ENST00000588935	FBXL7	Q9UJT9	491 aa		11.36	□□□□□ -0.59
CNN1-208	ENST00000588935	IGHV3-21	A0A0B4J1V1	117 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	NPIPB5	A8MRT5	1133 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	ADARB2-AS1	A8MUL3	147 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	PRAF2	O60831	178 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	NDUFB8	O95169	186 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	CRYGC	P07315	174 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	RHOG	P84095	191 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	KIAA0141	Q14154	515 aa	Predicted RBP	11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	IAH1	Q2TAA2	248 aa	Predicted RBP	11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	C8orf86	Q6ZUL3	223 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	NDUFA11	Q86Y39	141 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	OR2C3	Q8N628	320 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	ZNF491	Q8N8L2	437 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	HEYL	Q9NQ87	328 aa	Predicted RBP	11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	ZFP57	Q9NU63	452 aa		11.35	□□□□□ -0.59
CNN1-208	ENST00000588935	ANKRD34B	A5PLL1	514 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	SNRPGP15	A8MWD9	76 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	SSNA1	O43805	119 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	SIX6	O95475	246 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	SCGB1D2	O95969	90 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	IGHV3-23	P01764	117 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	IAPP	P10997	89 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	SNCA	P37840	140 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	TNFRSF9	Q07011	255 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	TATDN3	Q17R31	274 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	DEFB136	Q30KP8	78 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	MRPL41	Q8IXM3	137 aa	Known RBP	11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	RNF152	Q8N8N0	203 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	OR52E5	Q8NH55	327 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	FANCD2OS	Q96PS1	177 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	P2RX4	Q99571	388 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	SRSF8	Q9BRL6	282 aa	Known RBP	11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	SLA2	Q9H6Q3	261 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935	ALG5	Q9Y673	324 aa		11.34	□□□□□ -0.59
CNN1-208	ENST00000588935		H3BUA1	57 aa		11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	GOSR2	O14653	212 aa		11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	PITX3	O75364	302 aa		11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	TSPAN15	O95858	294 aa		11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	SLC25A6	P12236	298 aa		11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	CDX1	P47902	265 aa	Predicted RBP	11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	MFAP2	P55001	183 aa		11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	ATP5G2	Q06055	141 aa		11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	MISP3	Q96FF7	219 aa		11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	UBE2E2	Q96LR5	201 aa		11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	DMRT1	Q9Y5R6	373 aa		11.33	□□□□□ -0.6
CNN1-208	ENST00000588935	WRB	O00258	174 aa		11.32	□□□□□ -0.6
CNN1-208	ENST00000588935	AARD	Q4LEZ3	155 aa		11.32	□□□□□ -0.6
CNN1-208	ENST00000588935	GSG1L	Q6UXU4	331 aa		11.32	□□□□□ -0.6
CNN1-208	ENST00000588935	PINX1	Q96BK5	328 aa	Known RBP	11.32	□□□□□ -0.6
CNN1-208	ENST00000588935	HIPK2	Q9H2X6	1198 aa		11.32	□□□□□ -0.6
CNN1-208	ENST00000588935	HSPB7	Q9UBY9	170 aa		11.32	□□□□□ -0.6
CNN1-208	ENST00000588935	PAIP2B	Q9ULR5	123 aa	Known RBP	11.32	□□□□□ -0.6
CNN1-208	ENST00000588935	F11R	Q9Y624	299 aa	Known RBP	11.32	□□□□□ -0.6
CNN1-208	ENST00000588935	IGLV11-55	A0A075B6I3	123 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	TRBV9	A0A0B4J1U6	114 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935		A0A0G2JLM5	398 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935		M0QZ24	198 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	IFNA10	P01566	189 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	IGHV3-48	P01763	117 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	RNASE2	P10153	161 aa	Known RBP	11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	HIST1H1B	P16401	226 aa	Known RBP	11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	NKX2-1	P43699	371 aa	Predicted RBP	11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	POLR2G	P62487	172 aa	Known RBP eCLIP	11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	OXA1L	Q15070	435 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	C15orf32	Q32M92	178 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	NECAP1	Q8NC96	275 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	OR4D5	Q8NGN0	318 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	MYOZ3	Q8TDC0	251 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	DTD1	Q8TEA8	209 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	C2orf50	Q96LR7	162 aa		11.31	□□□□□ -0.6
CNN1-208	ENST00000588935	CYB5B	O43169	146 aa		11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	MED6	O75586	246 aa		11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	SUB1	P53999	127 aa	Known RBP eCLIP	11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	EXOSC2	Q13868	293 aa	Known RBP	11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	OR11H1	Q8NG94	326 aa		11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	OR1N2	Q8NGR9	330 aa		11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	OR1P1	Q8NH06	330 aa		11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	C4orf3	Q8WVX3	66 aa		11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	DPF1	Q92782	380 aa		11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	RAX2	Q96IS3	184 aa		11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	USMG5	Q96IX5	58 aa		11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	MGAT4C	Q9UBM8	478 aa		11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	LSM5	Q9Y4Y9	91 aa	Known RBP	11.3	□□□□□ -0.6
CNN1-208	ENST00000588935	C7orf66	A4D0T2	115 aa		11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	MFSD2B	A6NFX1	497 aa		11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	FAM223B	A6NKX1	122 aa		11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	CCL24	O00175	119 aa		11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	SYNGR2	O43760	224 aa		11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	TRBV12-3	P01733	135 aa		11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	PF4	P02776	101 aa		11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	LGALS1	P09382	135 aa	Known RBP	11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	ID3	Q02535	119 aa		11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	MLANA	Q16655	118 aa		11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	PDLIM3	Q53GG5	364 aa	Predicted RBP	11.29	□□□□□ -0.6
CNN1-208	ENST00000588935	CLEC19A	Q6UXS0	136 aa		11.29	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms