RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 TPSG1Q9NRR2 321 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 WDR83OSQ9Y284 106 aa7.06□□□□□ -1.28
SMAD4-206ENST00000588860 IGHV2-70DA0A0C4DH43 119 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 A0A1B0GW64 132 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 A0A1W2PN81 502 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 RBFOX3A6NFN3 312 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 ODF3BA8MYP8 253 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 MPDU1O75352 247 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 MBP02144 154 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 RNASE2P10153 161 aaKnown RBP7.05□□□□□ -1.28
SMAD4-206ENST00000588860 HOXB4P17483 251 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-206ENST00000588860 MDKP21741 143 aaPredicted RBP7.05□□□□□ -1.28
SMAD4-206ENST00000588860 CNTFRP26992 372 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 CHRNA7P36544 502 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 CEACAM3P40198 252 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 PPT1P50897 306 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 ERHP84090 104 aaKnown RBP7.05□□□□□ -1.28
SMAD4-206ENST00000588860 PSG5Q15238 335 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 ZNF726P1Q15940 193 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 HAGHQ16775 308 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 C2orf83Q53S99 150 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 C10orf55Q5SWW7 151 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 C10orf91Q5T1B1 145 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 FAM122CQ6P4D5 195 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 LCN15Q6UWW0 184 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 C1orf122Q6ZSJ8 110 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 SSX7Q7RTT5 188 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 TEX45Q8NA69 505 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 OR10W1Q8NGF6 305 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 IGFBPL1Q8WX77 278 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 PIMREGQ9BSJ6 248 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 SCRT1Q9BWW7 348 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 NDUFA4L2Q9NRX3 87 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 DPM3Q9P2X0 92 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 CARHSP1Q9Y2V2 147 aaKnown RBP7.05□□□□□ -1.28
SMAD4-206ENST00000588860 HILPDAQ9Y5L2 63 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 KPTNQ9Y664 436 aa7.05□□□□□ -1.28
SMAD4-206ENST00000588860 TRAV1-1A0A0B4J248 108 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 MAP1LC3B2A6NCE7 125 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 CGB1A6NKQ9 187 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 FAM157AC9JC47 383 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 TIMM23O14925 209 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 IGKV1D-33P01593 117 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 IGKV1-33P01594 117 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 CRYGBP07316 175 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 COX6B1P14854 86 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 FGF8P55075 233 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-206ENST00000588860 ATP5IP56385 69 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-206ENST00000588860 LMO4P61968 165 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 GNB1P62873 340 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 TNXAQ16473 311 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 PRSS8Q16651 343 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 GUCA2BQ16661 112 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 ACOT6Q3I5F7 207 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-206ENST00000588860 ARSJQ5FYB0 599 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-206ENST00000588860 LDLRAD2Q5SZI1 272 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 ATRAIDQ6UW56 229 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 LHFPL4Q7Z7J7 247 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 MRPL41Q8IXM3 137 aaKnown RBP7.04□□□□□ -1.28
SMAD4-206ENST00000588860 MMD2Q8IY49 270 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 SVBPQ8N300 66 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-206ENST00000588860 OR10G4Q8NGN3 311 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 OR10G9Q8NGN4 311 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 OR10G7Q8NGN6 311 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 MBD3L1Q8WWY6 194 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 FAM168AQ92567 244 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 MGST2Q99735 147 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 RARRES2Q99969 163 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 SEC11CQ9BY50 192 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 ACTR3CQ9C0K3 210 aaPredicted RBP7.04□□□□□ -1.28
SMAD4-206ENST00000588860 MAP1LC3BQ9GZQ8 125 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 SIRPDQ9H106 197 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 SLC25A22Q9H936 323 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 KCNIP2Q9NS61 270 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 KIAA1456Q9P272 454 aa7.04□□□□□ -1.28
SMAD4-206ENST00000588860 METTL1Q9UBP6 276 aaKnown RBP7.04□□□□□ -1.28
SMAD4-206ENST00000588860 KRTAP9-6A0A140TA67 174 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 CTXND1A0A1B0GTU2 59 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 LOC102723971A0A1B0GUV8 181 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 A6NJY4 79 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 FNDC10F2Z333 226 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 INS-IGF2F8WCM5 200 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 FOXH1O75593 365 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 EIF3GO75821 320 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMAD4-206ENST00000588860 ACTL6BO94805 426 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 TOX4O94842 621 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 VENTXO95231 258 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 M6PRP20645 277 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 MAS1LP35410 378 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 OPRK1P41145 380 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 RPL27AP46776 148 aaKnown RBP7.03□□□□□ -1.28
SMAD4-206ENST00000588860 SUB1P53999 127 aaKnown RBP eCLIP7.03□□□□□ -1.28
SMAD4-206ENST00000588860 ATP5J2P56134 94 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 LGALS4P56470 323 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 PAX2Q02962 417 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 RAB31Q13636 194 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 ICAM4Q14773 271 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 PLGLAQ15195 96 aa7.03□□□□□ -1.28
SMAD4-206ENST00000588860 MRGPRG-AS1Q2M3A8 158 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms