RNA–Protein interactions for RNA: ENST00000587290.5

PRKCSH-204, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 780 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-204ENST00000587290 HLA-DMAP28067 261 aa11.23□□□□□ -0.61
PRKCSH-204ENST00000587290 HRH1P35367 487 aa11.23□□□□□ -0.61
PRKCSH-204ENST00000587290 RPS19P39019 145 aaKnown RBP11.23□□□□□ -0.61
PRKCSH-204ENST00000587290 TFPI2P48307 235 aa11.23□□□□□ -0.61
PRKCSH-204ENST00000587290 THOC7Q6I9Y2 204 aaKnown RBP11.23□□□□□ -0.61
PRKCSH-204ENST00000587290 DHRS11Q6UWP2 260 aa11.23□□□□□ -0.61
PRKCSH-204ENST00000587290 S100A16Q96FQ6 103 aaKnown RBP11.23□□□□□ -0.61
PRKCSH-204ENST00000587290 RNF2Q99496 336 aa11.23□□□□□ -0.61
PRKCSH-204ENST00000587290 GPR31O00270 319 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 CYB5BO43169 146 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 SNAPC5O75971 98 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 EIF4EP06730 217 aaKnown RBP11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 CTSGP08311 255 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 FGF2P09038 288 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 BMI1P35226 326 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 TNFRSF9Q07011 255 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 SPINK9Q5DT21 86 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 SPSB3Q6PJ21 355 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 Q6ZWC4 215 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 WFDC3Q8IUB2 231 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 LYSMD2Q8IV50 215 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 TSPAN14Q8NG11 270 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 MISP3Q96FF7 219 aa11.22□□□□□ -0.61
PRKCSH-204ENST00000587290 NUPR2A6NF83 97 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 OR4C46A6NHA9 309 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 C15orf61A6NNL5 157 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 IGKV1-39P01597 117 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 IGKV1D-39P04432 117 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 NAT1P18440 290 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 TAS2R46P59540 309 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 IZUMO4Q1ZYL8 232 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 LAMTOR1Q6IAA8 161 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 HSD17B13Q7Z5P4 300 aaPredicted RBP11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 STPG3Q8N7X2 389 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 OR6F1Q8NGZ6 308 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 BORCS5Q969J3 196 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 SLC25A46Q96AG3 418 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 RNF183Q96D59 192 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 TMEM14BQ9NUH8 114 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 TP53TG1Q9Y2A0 90 aa11.21□□□□□ -0.61
PRKCSH-204ENST00000587290 AGRNO00468 2067 aa11.21□□□□□ -0.62
PRKCSH-204ENST00000587290 YIF1AO95070 293 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 PRSS3P35030 304 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 KCTD21Q4G0X4 260 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 CEMP1Q6PRD7 247 aaPredicted RBP11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 TBC1D26Q86UD7 250 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 CMTM1Q8IZ96 169 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 GBGT1Q8N5D6 347 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 RPP25LQ8N5L8 163 aaKnown RBP11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 MRGPRFQ96AM1 343 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 PINX1Q96BK5 328 aaKnown RBP11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 YIPF6Q96EC8 236 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 RHPN1-AS1Q9BWJ2 59 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 MAP6D1Q9H9H5 199 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 SMPXQ9UHP9 88 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 PRNDQ9UKY0 176 aa11.2□□□□□ -0.62
PRKCSH-204ENST00000587290 IGHV7-4-1A0A0J9YVY3 117 aa11.19□□□□□ -0.62
PRKCSH-204ENST00000587290 C15orf62A8K5M9 175 aa11.19□□□□□ -0.62
PRKCSH-204ENST00000587290 I3L2K1 104 aa11.19□□□□□ -0.62
PRKCSH-204ENST00000587290 K7EMT4 169 aa11.19□□□□□ -0.62
PRKCSH-204ENST00000587290 CHEK1O14757 476 aa11.19□□□□□ -0.62
PRKCSH-204ENST00000587290 RNASE12Q5GAN4 147 aaKnown RBP11.19□□□□□ -0.62
PRKCSH-204ENST00000587290 SNX29P2Q8IUI4 249 aa11.19□□□□□ -0.62
PRKCSH-204ENST00000587290 OR1P1Q8NH06 330 aa11.19□□□□□ -0.62
PRKCSH-204ENST00000587290 SEC22AQ96IW7 307 aa11.19□□□□□ -0.62
PRKCSH-204ENST00000587290 TMEM56Q96MV1 263 aa11.19□□□□□ -0.62
PRKCSH-204ENST00000587290 IGHV3-66A0A0C4DH42 116 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 KIR2DL5BA0A0G2JN68 375 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 KIR2DL5BA0A0G2JPC4 375 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 UBE2CO00762 179 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 NUPL2O15504 423 aaKnown RBP11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 DEDDO75618 318 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 MT-CO2P00403 227 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 KIR2DL5AQ8N109 375 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 TMEM116Q8NCL8 245 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 KIR2DL5BQ8NHK3 375 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 GPX8Q8TED1 209 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 GALNT14Q96FL9 552 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 COMMD3Q9UBI1 195 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 DNAH10Q8IVF4 4471 aa11.18□□□□□ -0.62
PRKCSH-204ENST00000587290 M0QYG6 137 aa11.17□□□□□ -0.62
PRKCSH-204ENST00000587290 APOHP02749 345 aaPredicted RBP11.17□□□□□ -0.62
PRKCSH-204ENST00000587290 PI3P19957 117 aa11.17□□□□□ -0.62
PRKCSH-204ENST00000587290 TSPAN5P62079 268 aa11.17□□□□□ -0.62
PRKCSH-204ENST00000587290 NCS1P62166 190 aa11.17□□□□□ -0.62
PRKCSH-204ENST00000587290 H2BFWTQ7Z2G1 175 aa11.17□□□□□ -0.62
PRKCSH-204ENST00000587290 CROCCP3Q8IVE0 287 aa11.17□□□□□ -0.62
PRKCSH-204ENST00000587290 LILRB2Q8N423 598 aa11.17□□□□□ -0.62
PRKCSH-204ENST00000587290 FKBP11Q9NYL4 201 aa11.17□□□□□ -0.62
PRKCSH-204ENST00000587290 DEFB4AO15263 64 aa11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 TMEM127O75204 238 aa11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 MFAP4P55083 255 aa11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 PRCDQ00LT1 54 aa11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 RELQ04864 619 aaPredicted RBP11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 FAM90A2PQ658T7 463 aa11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 OR4A16Q8NH70 328 aa11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 PHLDA1Q8WV24 401 aaPredicted RBP11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 ST8SIA2Q92186 375 aa11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 OR10C1Q96KK4 312 aa11.16□□□□□ -0.62
PRKCSH-204ENST00000587290 ATP6V0BQ99437 205 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms