RNA–Protein interactions for RNA: ENST00000586407.1

LIG3-208, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-208ENST00000586407 COPZ2Q9P299 210 aa21.22■□□□□ 0.99
LIG3-208ENST00000586407 TENM3Q9P273 2699 aa21.22■□□□□ 0.99
LIG3-208ENST00000586407 HUWE1Q7Z6Z7 4374 aaKnown RBP21.21■□□□□ 0.99
LIG3-208ENST00000586407 C3orf85A0A1B0GTC6 90 aa21.21■□□□□ 0.99
LIG3-208ENST00000586407 OR2T8A6NH00 312 aa21.21■□□□□ 0.99
LIG3-208ENST00000586407 ZNF785A8K8V0 405 aa21.21■□□□□ 0.99
LIG3-208ENST00000586407 CBLN1P23435 193 aa21.21■□□□□ 0.99
LIG3-208ENST00000586407 OR2K2Q8NGT1 345 aa21.21■□□□□ 0.99
LIG3-208ENST00000586407 VN1R17PQ8TDU5 208 aa21.21■□□□□ 0.99
LIG3-208ENST00000586407 RCHY1Q96PM5 261 aa21.21■□□□□ 0.99
LIG3-208ENST00000586407 A8MWP6 167 aa21.2■□□□□ 0.98
LIG3-208ENST00000586407 K7EIM0 57 aa21.2■□□□□ 0.98
LIG3-208ENST00000586407 TGOLN2O43493 480 aa21.2■□□□□ 0.98
LIG3-208ENST00000586407 CD81P60033 236 aa21.2■□□□□ 0.98
LIG3-208ENST00000586407 SSBP1Q04837 148 aaKnown RBP21.2■□□□□ 0.98
LIG3-208ENST00000586407 GUCA2BQ16661 112 aa21.2■□□□□ 0.98
LIG3-208ENST00000586407 OR4C16Q8NGL9 310 aa21.2■□□□□ 0.98
LIG3-208ENST00000586407 ZFAND1Q8TCF1 268 aa21.2■□□□□ 0.98
LIG3-208ENST00000586407 SCARB1Q8WTV0 552 aa21.2■□□□□ 0.98
LIG3-208ENST00000586407 PLEKHA3Q9HB20 300 aa21.2■□□□□ 0.98
LIG3-208ENST00000586407 MLXQ9UH92 298 aa21.2■□□□□ 0.98
LIG3-208ENST00000586407 CYB5BO43169 146 aa21.19■□□□□ 0.98
LIG3-208ENST00000586407 CD7P09564 240 aa21.19■□□□□ 0.98
LIG3-208ENST00000586407 AKR1C2P52895 323 aa21.19■□□□□ 0.98
LIG3-208ENST00000586407 TRIM16LQ309B1 348 aa21.19■□□□□ 0.98
LIG3-208ENST00000586407 OR2C3Q8N628 320 aa21.19■□□□□ 0.98
LIG3-208ENST00000586407 UBAC2Q8NBM4 344 aa21.19■□□□□ 0.98
LIG3-208ENST00000586407 UXS1Q8NBZ7 420 aa21.19■□□□□ 0.98
LIG3-208ENST00000586407 CHRDL1Q9BU40 450 aa21.19■□□□□ 0.98
LIG3-208ENST00000586407 WFDC10AQ9H1F0 79 aa21.19■□□□□ 0.98
LIG3-208ENST00000586407 CEPT1Q9Y6K0 416 aa21.19■□□□□ 0.98
LIG3-208ENST00000586407 F8W735 103 aaPredicted RBP21.18■□□□□ 0.98
LIG3-208ENST00000586407 CTDSPLO15194 276 aa21.18■□□□□ 0.98
LIG3-208ENST00000586407 CTSDP07339 412 aaPredicted RBP21.18■□□□□ 0.98
LIG3-208ENST00000586407 PRCDQ00LT1 54 aa21.18■□□□□ 0.98
LIG3-208ENST00000586407 MEF2DQ14814 521 aa21.18■□□□□ 0.98
LIG3-208ENST00000586407 CCDC71LQ8N9Z2 235 aa21.18■□□□□ 0.98
LIG3-208ENST00000586407 MCFD2Q8NI22 146 aa21.18■□□□□ 0.98
LIG3-208ENST00000586407 C21orf62Q9NYP8 219 aa21.18■□□□□ 0.98
LIG3-208ENST00000586407 A0A0G2JRQ6 117 aa21.17■□□□□ 0.98
LIG3-208ENST00000586407 A8MZ25 164 aa21.17■□□□□ 0.98
LIG3-208ENST00000586407 P0C879 139 aa21.17■□□□□ 0.98
LIG3-208ENST00000586407 TNFSF8P32971 234 aa21.17■□□□□ 0.98
LIG3-208ENST00000586407 HSPE1P61604 102 aaKnown RBP21.17■□□□□ 0.98
LIG3-208ENST00000586407 BTNL8Q6UX41 500 aa21.17■□□□□ 0.98
LIG3-208ENST00000586407 TMEM61Q8N0U2 210 aa21.17■□□□□ 0.98
LIG3-208ENST00000586407 MISP3Q96FF7 219 aa21.17■□□□□ 0.98
LIG3-208ENST00000586407 NEURL2Q9BR09 285 aa21.17■□□□□ 0.98
LIG3-208ENST00000586407 RTBDNQ9BSG5 229 aaPredicted RBP21.17■□□□□ 0.98
LIG3-208ENST00000586407 IGHV3OR16-8A0A075B7F1 116 aa21.16■□□□□ 0.98
LIG3-208ENST00000586407 A0A0B4J293 547 aa21.16■□□□□ 0.98
LIG3-208ENST00000586407 DISC1C4P0D8 188 aa21.16■□□□□ 0.98
LIG3-208ENST00000586407 IGHV3-48P01763 117 aa21.16■□□□□ 0.98
LIG3-208ENST00000586407 AKAIN1P0CW23 69 aa21.16■□□□□ 0.98
LIG3-208ENST00000586407 Q56UQ5 140 aa21.16■□□□□ 0.98
LIG3-208ENST00000586407 OR1P1Q8NH06 330 aa21.16■□□□□ 0.98
LIG3-208ENST00000586407 TUBA4BQ9H853 241 aa21.16■□□□□ 0.98
LIG3-208ENST00000586407 TECRQ9NZ01 308 aaKnown RBP21.16■□□□□ 0.98
LIG3-208ENST00000586407 OR5AC1P0C628 307 aa21.15■□□□□ 0.98
LIG3-208ENST00000586407 UCP1P25874 307 aa21.15■□□□□ 0.98
LIG3-208ENST00000586407 ADMP35318 185 aa21.15■□□□□ 0.98
LIG3-208ENST00000586407 ZNF436Q9C0F3 470 aaPredicted RBP21.15■□□□□ 0.98
LIG3-208ENST00000586407 C14orf166Q9Y224 244 aaKnown RBP21.15■□□□□ 0.98
LIG3-208ENST00000586407 ST8SIA3O43173 380 aa21.14■□□□□ 0.97
LIG3-208ENST00000586407 SCAF4O95104 1147 aaKnown RBP21.14■□□□□ 0.97
LIG3-208ENST00000586407 ZNF57Q68EA5 555 aaPredicted RBP21.14■□□□□ 0.97
LIG3-208ENST00000586407 DEFB125Q8N687 156 aa21.14■□□□□ 0.97
LIG3-208ENST00000586407 OR51S1Q8NGJ8 323 aa21.14■□□□□ 0.97
LIG3-208ENST00000586407 TMEM190Q8WZ59 177 aa21.14■□□□□ 0.97
LIG3-208ENST00000586407 BSCL2Q96G97 398 aaPredicted RBP21.14■□□□□ 0.97
LIG3-208ENST00000586407 TM2D3Q9BRN9 247 aa21.14■□□□□ 0.97
LIG3-208ENST00000586407 NXF2Q9GZY0 626 aaKnown RBP21.14■□□□□ 0.97
LIG3-208ENST00000586407 C5orf66Q9H5L9 145 aa21.14■□□□□ 0.97
LIG3-208ENST00000586407 ZMAT4Q9H898 229 aa21.14■□□□□ 0.97
LIG3-208ENST00000586407 CCDC160A6NGH7 325 aa21.13■□□□□ 0.97
LIG3-208ENST00000586407 GSTZ1O43708 216 aaPredicted RBP21.13■□□□□ 0.97
LIG3-208ENST00000586407 HAGHQ16775 308 aa21.13■□□□□ 0.97
LIG3-208ENST00000586407 LHFPL5Q8TAF8 219 aa21.13■□□□□ 0.97
LIG3-208ENST00000586407 SOSTQ9BQB4 213 aa21.13■□□□□ 0.97
LIG3-208ENST00000586407 SLC2A8Q9NY64 477 aa21.13■□□□□ 0.97
LIG3-208ENST00000586407 ANKRD20A5PA0PJZ0 165 aa21.12■□□□□ 0.97
LIG3-208ENST00000586407 I3L2K1 104 aa21.12■□□□□ 0.97
LIG3-208ENST00000586407 ZNF207O43670 478 aaKnown RBP21.12■□□□□ 0.97
LIG3-208ENST00000586407 SLC35G3Q8N808 338 aa21.12■□□□□ 0.97
LIG3-208ENST00000586407 OR1L6Q8NGR2 347 aa21.12■□□□□ 0.97
LIG3-208ENST00000586407 RNASE11Q8TAA1 199 aaKnown RBP21.12■□□□□ 0.97
LIG3-208ENST00000586407 PINX1Q96BK5 328 aaKnown RBP21.12■□□□□ 0.97
LIG3-208ENST00000586407 ZNF414Q96IQ9 312 aa21.12■□□□□ 0.97
LIG3-208ENST00000586407 NAA60Q9H7X0 242 aa21.12■□□□□ 0.97
LIG3-208ENST00000586407 PALMDQ9NP74 551 aa21.12■□□□□ 0.97
LIG3-208ENST00000586407 RABL2AQ9UBK7 228 aaPredicted RBP21.12■□□□□ 0.97
LIG3-208ENST00000586407 RSL24D1Q9UHA3 163 aaKnown RBP21.12■□□□□ 0.97
LIG3-208ENST00000586407 RABL2BQ9UNT1 228 aa21.12■□□□□ 0.97
LIG3-208ENST00000586407 UFC1Q9Y3C8 167 aa21.12■□□□□ 0.97
LIG3-208ENST00000586407 TEX13DA0A0J9YY54 714 aaPredicted RBP21.11■□□□□ 0.97
LIG3-208ENST00000586407 FABP12A6NFH5 140 aa21.11■□□□□ 0.97
LIG3-208ENST00000586407 MT-CO2P00403 227 aa21.11■□□□□ 0.97
LIG3-208ENST00000586407 ETV6P41212 452 aa21.11■□□□□ 0.97
LIG3-208ENST00000586407 Q6ZRM9 215 aa21.11■□□□□ 0.97
LIG3-208ENST00000586407 ZNF114Q8NC26 417 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms