RNA–Protein interactions for RNA: ENST00000585740.5

LIG3-204, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-204ENST00000585740 GGTLC1Q9BX51 225 aa9.12□□□□□ -0.95
LIG3-204ENST00000585740 SLC25A22Q9H936 323 aa9.12□□□□□ -0.95
LIG3-204ENST00000585740 LSM4Q9Y4Z0 139 aaKnown RBP9.12□□□□□ -0.95
LIG3-204ENST00000585740 INSIG2Q9Y5U4 225 aa9.12□□□□□ -0.95
LIG3-204ENST00000585740 TNCP24821 2201 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 LOC105371242A0A075B767 164 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 A6NNC1 897 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 B4DEV8 164 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 IGLV2-23P01705 113 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 SNRNP70P08621 437 aaKnown RBP9.11□□□□□ -0.95
LIG3-204ENST00000585740 RNASE2P10153 161 aaKnown RBP9.11□□□□□ -0.95
LIG3-204ENST00000585740 PNRC1Q12796 327 aaPredicted RBP9.11□□□□□ -0.95
LIG3-204ENST00000585740 HNF4GQ14541 408 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 TMEM88Q6PEY1 159 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 C1orf122Q6ZSJ8 110 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 SSX7Q7RTT5 188 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 TMEM144Q7Z5S9 345 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 CBLN2Q8IUK8 224 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 KIR3DL3Q8N743 410 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 Q8N7P7 452 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 CYB561D1Q8N8Q1 229 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 NANPQ8TBE9 248 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 RNASEH2CQ8TDP1 164 aaKnown RBP9.11□□□□□ -0.95
LIG3-204ENST00000585740 RAB24Q969Q5 203 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 RPEQ96AT9 228 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 MGST2Q99735 147 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 TXNDC17Q9BRA2 123 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 ONECUT1Q9UBC0 465 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 PUS1Q9Y606 427 aaKnown RBP eCLIP9.11□□□□□ -0.95
LIG3-204ENST00000585740 PXMP4Q9Y6I8 212 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 POLQO75417 2590 aa9.11□□□□□ -0.95
LIG3-204ENST00000585740 A0A087WWC5 75 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 IGHV1-3A0A0C4DH29 117 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 LOC105371267A0A1B0GV96 52 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 TMEM250H0YL14 139 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 H3BQ15 152 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 ENSAO43768 121 aaKnown RBP9.1□□□□□ -0.95
LIG3-204ENST00000585740 MT-CO2P00403 227 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 MYOD1P15172 320 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 IGFBP2P18065 325 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 CEACAM3P40198 252 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 EFNA4P52798 201 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 B2MP61769 119 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 MEF2BQ02080 365 aaPredicted RBP9.1□□□□□ -0.95
LIG3-204ENST00000585740 CD69Q07108 199 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 DIAPH2-AS1Q14236 149 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 ARSJQ5FYB0 599 aaPredicted RBP9.1□□□□□ -0.95
LIG3-204ENST00000585740 MOB3BQ86TA1 216 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 OR11H6Q8NGC7 330 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 SLC35E1Q96K37 410 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 UBTD1Q9HAC8 227 aa9.1□□□□□ -0.95
LIG3-204ENST00000585740 C22orf46C9J442 243 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 LY6LH3BQJ8 138 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 SLC25A17O43808 307 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 YIF1AO95070 293 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 CXorf1O96002 111 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 PRTN3P24158 256 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 COX7A1P24310 79 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 HTR1DP28221 377 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 COMPP49747 757 aaPredicted RBP9.09□□□□□ -0.95
LIG3-204ENST00000585740 CEBPGP53567 150 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 RHOBP62745 196 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 FLI1Q01543 452 aaPredicted RBP9.09□□□□□ -0.95
LIG3-204ENST00000585740 AKIRIN2Q53H80 203 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 MIC13Q5XKP0 118 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 ETFRF1Q6IPR1 90 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 PNKDQ8N490 385 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 OR4P4Q8NGL7 312 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 C19orf24Q9BVV8 132 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 ZNF430Q9H8G1 570 aaPredicted RBP9.09□□□□□ -0.95
LIG3-204ENST00000585740 SIRT7Q9NRC8 400 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 PRELID1Q9Y255 219 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 OTOGQ6ZRI0 2925 aa9.09□□□□□ -0.95
LIG3-204ENST00000585740 OOSP1A8MZH6 123 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 ACTL6BO94805 426 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 OPN1MWP04001 364 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 CRYGBP07316 175 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 STAG3L2P0CL84 134 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 STAG3L3P0CL85 134 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 OPN1MW2P0DN77 364 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 OPN1MW3P0DN78 364 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 RPL27AP46776 148 aaKnown RBP9.08□□□□□ -0.96
LIG3-204ENST00000585740 PSG5Q15238 335 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 PRSS8Q16651 343 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 TPTE2P1Q5T6R2 138 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 FAM90A2PQ658T7 463 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 SLC16A13Q7RTY0 426 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 STPG3Q8N7X2 389 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 RNF2Q99496 336 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 DPM3Q9P2X0 92 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 ITPR3Q14573 2671 aa9.08□□□□□ -0.96
LIG3-204ENST00000585740 CXorf65A6NEN9 183 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 COLCA2A8K830 154 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 F6UZH7 168 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 CORTO00230 105 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 PDE6DO43924 150 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 LY6HO94772 140 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 MT-ND4LP03901 98 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 FBP1P09467 338 aa9.07□□□□□ -0.96
LIG3-204ENST00000585740 FOLR2P14207 255 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms