RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 PPP1R17O96001 155 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 MOSP00540 346 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 OR9G9P0C7N8 305 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 VDAC2P45880 294 aaPredicted RBP4.83□□□□□ -1.64
RTTN-209ENST00000583043 IER3P46695 156 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 TFF3Q07654 80 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 SPINK9Q5DT21 86 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 TEX38Q6PEX7 206 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 EAF1Q96JC9 268 aaPredicted RBP4.83□□□□□ -1.64
RTTN-209ENST00000583043 MAP1LC3CQ9BXW4 147 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 PLXND1Q9Y4D7 1925 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 C15orf65H3BRN8 121 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 ATG101Q9BSB4 218 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 GSX1Q9H4S2 264 aaPredicted RBP4.83□□□□□ -1.64
RTTN-209ENST00000583043 MED19A0JLT2 244 aaPredicted RBP4.83□□□□□ -1.64
RTTN-209ENST00000583043 FAM90A27PA6NNH2 459 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 TNFSF13O75888 250 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 COX7A1P24310 79 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 KRTDAPP60985 99 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HBBP68871 147 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 BSPH1Q075Z2 132 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 PDZD11Q5EBL8 140 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 CENPWQ5EE01 88 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 GFRA4Q9GZZ7 299 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 UQCR10Q9UDW1 63 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 GCSHP23434 173 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 OR5I1Q13606 314 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 KHDC1LQ5JSQ8 128 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 ZNF833PQ6ZTB9 187 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 COL25A1Q9BXS0 654 aaPredicted RBP4.83□□□□□ -1.64
RTTN-209ENST00000583043 LIME1Q9H400 295 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST1H2BKO60814 126 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST1H2BJP06899 126 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 NBEAP1P0C6P0 100 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST1H2BOP23527 126 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST1H2BBP33778 126 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST1H2BDP58876 126 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST1H2BCP62807 126 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 TBR1Q16650 682 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST2H2BEQ16778 126 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.83□□□□□ -1.64
RTTN-209ENST00000583043 FAM231DQ6ZW35 169 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 ST6GALNAC3Q8NDV1 305 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST1H2BHQ93079 126 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST1H2BNQ99877 126 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 HIST1H2BMQ99879 126 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 SLC50A1Q9BRV3 221 aa4.83□□□□□ -1.64
RTTN-209ENST00000583043 MRPL20Q9BYC9 149 aaKnown RBP4.83□□□□□ -1.64
RTTN-209ENST00000583043 C22orf46C9J442 243 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 NBL1P41271 181 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 RPL30P62888 115 aaKnown RBP4.82□□□□□ -1.64
RTTN-209ENST00000583043 ZNF474Q6S9Z5 364 aaPredicted RBP4.82□□□□□ -1.64
RTTN-209ENST00000583043 LINC01551Q86U37 167 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 FAM216BQ8N7L0 139 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 NEUROG1Q92886 237 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 BSCL2Q96G97 398 aaPredicted RBP4.82□□□□□ -1.64
RTTN-209ENST00000583043 GPR61Q9BZJ8 451 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 LINC00574Q9H8X3 128 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 MRPL27Q9P0M9 148 aaKnown RBP4.82□□□□□ -1.64
RTTN-209ENST00000583043 PGPA6NDG6 321 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 M0R2Z0 102 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 RAMP3O60896 148 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 NTF3P20783 257 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 NTF4P34130 210 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 MFAP2P55001 183 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 FAM27E3Q08E93 113 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 PRR27Q6MZM9 219 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 C1orf122Q6ZSJ8 110 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 OR5AN1Q8NGI8 311 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 PRSS3P2Q8NHM4 247 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 NPIPB3Q92617 1050 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 ZDHHC16Q969W1 377 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 PYGO2Q9BRQ0 406 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 LRP4O75096 1905 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 ABCA7Q8IZY2 2146 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 NCBP2LA6PVI3 153 aaKnown RBP4.82□□□□□ -1.64
RTTN-209ENST00000583043 IGFBP2P18065 325 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 CRYBB3P26998 211 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 ID1P41134 155 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 PDLIM4P50479 330 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 NHLH1Q02575 133 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 PDE6HQ13956 83 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 GUSBP1Q15486 140 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 PRSS8Q16651 343 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 ACTL10Q5JWF8 245 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 KIR3DL3Q8N743 410 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 C8orf46Q8TAG6 207 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 DPF1Q92782 380 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 RABAC1Q9UI14 185 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 TBL2Q9Y4P3 447 aaKnown RBP4.82□□□□□ -1.64
RTTN-209ENST00000583043 NBR2O15453 112 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 CGAP01215 116 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 FOSL1P15407 271 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 COA6Q5JTJ3 125 aaKnown RBP4.82□□□□□ -1.64
RTTN-209ENST00000583043 OR8I2Q8N0Y5 310 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 ABHD17AQ96GS6 310 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 ZNF492Q9P255 531 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 HEATR5AQ86XA9 2040 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 H0YJW9 148 aa4.82□□□□□ -1.64
RTTN-209ENST00000583043 DSCR9P59020 149 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms