RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 FOXL1Q12952 345 aa9.73□□□□□ -0.85
CDH8-208ENST00000582980 LRRC37A5PQ49AS3 106 aa9.73□□□□□ -0.85
CDH8-208ENST00000582980 CTRB2Q6GPI1 263 aa9.73□□□□□ -0.85
CDH8-208ENST00000582980 CENPVQ7Z7K6 275 aaPredicted RBP9.73□□□□□ -0.85
CDH8-208ENST00000582980 NOXA1Q86UR1 476 aa9.73□□□□□ -0.85
CDH8-208ENST00000582980 ZNF114Q8NC26 417 aa9.73□□□□□ -0.85
CDH8-208ENST00000582980 SLC24A4Q8NFF2 622 aa9.73□□□□□ -0.85
CDH8-208ENST00000582980 OR5T1Q8NG75 326 aa9.73□□□□□ -0.85
CDH8-208ENST00000582980 TAF15Q92804 592 aaKnown RBP eCLIP9.73□□□□□ -0.85
CDH8-208ENST00000582980 WNT10AQ9GZT5 417 aa9.73□□□□□ -0.85
CDH8-208ENST00000582980 RCL1Q9Y2P8 373 aaKnown RBP9.73□□□□□ -0.85
CDH8-208ENST00000582980 RNF114Q9Y508 228 aa9.73□□□□□ -0.85
CDH8-208ENST00000582980 U3KQ87 197 aa9.73□□□□□ -0.85
CDH8-208ENST00000582980 NIPBLQ6KC79 2804 aaeCLIP9.73□□□□□ -0.85
CDH8-208ENST00000582980 TMEM89A2RUT3 159 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 DEDDO75618 318 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 MPC2O95563 127 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 IFNA10P01566 189 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 NPY1RP25929 384 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 PPIFP30405 207 aaKnown RBP9.72□□□□□ -0.85
CDH8-208ENST00000582980 RPL23AP62750 156 aaKnown RBP9.72□□□□□ -0.85
CDH8-208ENST00000582980 CFHR3Q02985 330 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 TEX38Q6PEX7 206 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 COMMD1Q8N668 190 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 OR1P1Q8NH06 330 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 SMIM8Q96KF7 97 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 ZNF355PQ9NSJ1 428 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 PSENENQ9NZ42 101 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 THYN1Q9P016 225 aa9.72□□□□□ -0.85
CDH8-208ENST00000582980 F11RQ9Y624 299 aaKnown RBP9.72□□□□□ -0.85
CDH8-208ENST00000582980 C2CD3Q4AC94 2353 aa9.71□□□□□ -0.85
CDH8-208ENST00000582980 JMJD1CQ15652 2540 aa9.71□□□□□ -0.85
CDH8-208ENST00000582980 E5RGE8 158 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 CORTO00230 105 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 TSC22D2O75157 780 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 CCNKO75909 580 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 BRI3O95415 125 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 IGHG4P01861 327 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 HIST1H1BP16401 226 aaKnown RBP9.71□□□□□ -0.86
CDH8-208ENST00000582980 MDKP21741 143 aaPredicted RBP9.71□□□□□ -0.86
CDH8-208ENST00000582980 RAB11AP62491 216 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 TMEM65Q6PI78 240 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 AKAP14Q86UN6 197 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 KLHDC1Q8N7A1 406 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 OR4X2Q8NGF9 303 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 OR2T35Q8NGX2 323 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 THAP6Q8TBB0 222 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 TMEM158Q8WZ71 300 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 WDR89Q96FK6 387 aaPredicted RBP9.71□□□□□ -0.86
CDH8-208ENST00000582980 P2RX4Q99571 388 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 SLA2Q9H6Q3 261 aa9.71□□□□□ -0.86
CDH8-208ENST00000582980 STRAPQ9Y3F4 350 aaKnown RBP9.71□□□□□ -0.86
CDH8-208ENST00000582980 H3BP45 60 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 SCAF4O95104 1147 aaKnown RBP9.7□□□□□ -0.86
CDH8-208ENST00000582980 IGLV1-40P01703 118 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 ELANEP08246 267 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 OR8U8P0C7N1 319 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 RNASE2P10153 161 aaKnown RBP9.7□□□□□ -0.86
CDH8-208ENST00000582980 PF4V1P10720 104 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 PROK1P58294 105 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 FOXE3Q13461 319 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 BSXQ3C1V8 233 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 KRTAP24-1Q3LI83 254 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 C2orf83Q53S99 150 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 SPANXN5Q5MJ07 72 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 SLC25A24Q6NUK1 477 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 PRSS54Q6PEW0 395 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 ZNF329Q86UD4 541 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 OR5AU1Q8NGC0 362 aa9.7□□□□□ -0.86
CDH8-208ENST00000582980 RANGRFQ9HD47 186 aaPredicted RBP9.7□□□□□ -0.86
CDH8-208ENST00000582980 FAM223BA6NKX1 122 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 HAX1O00165 279 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 SOX15O60248 233 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 TRGV3P03979 118 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 IFNA4P05014 189 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 PSMB8P28062 276 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 P2RY1P47900 373 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 CAV2P51636 162 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 TPPP2P59282 170 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 EXOSC2Q13868 293 aaKnown RBP9.69□□□□□ -0.86
CDH8-208ENST00000582980 C11orf87Q6NUJ2 197 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 FAM223AQ8IWN6 122 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 RNASEH2CQ8TDP1 164 aaKnown RBP9.69□□□□□ -0.86
CDH8-208ENST00000582980 C19orf24Q9BVV8 132 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 LYRM2Q9NU23 88 aaPredicted RBP9.69□□□□□ -0.86
CDH8-208ENST00000582980 MBD2Q9UBB5 411 aa9.69□□□□□ -0.86
CDH8-208ENST00000582980 PAIP2BQ9ULR5 123 aaKnown RBP9.69□□□□□ -0.86
CDH8-208ENST00000582980 IGLV11-55A0A075B6I3 123 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 TRAV14DV4A0A0A6YYC5 116 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 TRBV9A0A0B4J1U6 114 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 C15orf62A8K5M9 175 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 H0YIZ8 118 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 TMEM50AO95807 157 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 PRH1P02810 166 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 LYL1P12980 280 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 RAB9AP51151 201 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 PAX9P55771 341 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 KLK9Q2XQG4 91 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 C19orf35Q6ZS72 473 aa9.68□□□□□ -0.86
CDH8-208ENST00000582980 STX12Q86Y82 276 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms