RNA–Protein interactions for RNA: ENST00000582792.5

SS18-222, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 531 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-222ENST00000582792 GPHA2Q96T91 129 aa10.17□□□□□ -0.78
SS18-222ENST00000582792 OVOL2Q9BRP0 275 aa10.17□□□□□ -0.78
SS18-222ENST00000582792 C5orf66Q9H5L9 145 aa10.17□□□□□ -0.78
SS18-222ENST00000582792 BET1LQ9NYM9 111 aa10.17□□□□□ -0.78
SS18-222ENST00000582792 DMRT1Q9Y5R6 373 aa10.17□□□□□ -0.78
SS18-222ENST00000582792 PPP5D1E7EU14 171 aa10.16□□□□□ -0.78
SS18-222ENST00000582792 GGCTO75223 188 aaKnown RBP10.16□□□□□ -0.78
SS18-222ENST00000582792 IL6RP08887 468 aaPredicted RBP10.16□□□□□ -0.78
SS18-222ENST00000582792 RBMS2Q15434 407 aaKnown RBP10.16□□□□□ -0.78
SS18-222ENST00000582792 C15orf32Q32M92 178 aa10.16□□□□□ -0.78
SS18-222ENST00000582792 OR2B11Q5JQS5 317 aa10.16□□□□□ -0.78
SS18-222ENST00000582792 TTC9CQ8N5M4 171 aa10.16□□□□□ -0.78
SS18-222ENST00000582792 TMEM167AQ8TBQ9 72 aa10.16□□□□□ -0.78
SS18-222ENST00000582792 OR2A7Q96R45 310 aa10.16□□□□□ -0.78
SS18-222ENST00000582792 SPIN2AQ99865 258 aa10.16□□□□□ -0.78
SS18-222ENST00000582792 SPIN2BQ9BPZ2 258 aa10.16□□□□□ -0.78
SS18-222ENST00000582792 GGTLC1Q9BX51 225 aa10.16□□□□□ -0.78
SS18-222ENST00000582792 C3orf85A0A1B0GTC6 90 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 CXorf65A6NEN9 183 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 NUPR2A6NF83 97 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 CRYM-AS1A6NIL9 109 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 PLA2G10O15496 165 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 UPK1BO75841 260 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 OR2J3O76001 311 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 ACTL6BO94805 426 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 ATG12O94817 140 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 OR2C1O95371 312 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 HLA-AP01891 365 aaKnown RBP10.15□□□□□ -0.78
SS18-222ENST00000582792 SAA1P0DJI8 122 aaPredicted RBP10.15□□□□□ -0.78
SS18-222ENST00000582792 PI3P19957 117 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 CBLN1P23435 193 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 UCP1P25874 307 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 MAS1LP35410 378 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 LPAR6P43657 344 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 UBE2MP61081 183 aaKnown RBP10.15□□□□□ -0.78
SS18-222ENST00000582792 DHODHQ02127 395 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 PMS2P11Q13670 270 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 MMD2Q8IY49 270 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 GALNT14Q96FL9 552 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 NAA60Q9H7X0 242 aa10.15□□□□□ -0.78
SS18-222ENST00000582792 ZNF430Q9H8G1 570 aaPredicted RBP10.15□□□□□ -0.78
SS18-222ENST00000582792 KMT2AQ03164 3969 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 LOC102724200A0A096LPH7 203 aaPredicted RBP10.14□□□□□ -0.79
SS18-222ENST00000582792 PIGBOS1A0A0B4J2F0 54 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 TEX13DA0A0J9YY54 714 aaPredicted RBP10.14□□□□□ -0.79
SS18-222ENST00000582792 LYRM1O43325 122 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 KBTBD11O94819 623 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 S1PR2O95136 353 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 NDUFB6O95139 128 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 SERPINE2P07093 398 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 BTCP35070 178 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 ERVK-16P61578 105 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 C10orf55Q5SWW7 151 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 SLC25A42Q86VD7 318 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 GPHB5Q86YW7 130 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 TMEM61Q8N0U2 210 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 CACNG8Q8WXS5 425 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 ZNF257Q9Y2Q1 563 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 KCNIP3Q9Y2W7 256 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 DNAH10Q8IVF4 4471 aa10.14□□□□□ -0.79
SS18-222ENST00000582792 ASAH1Q13510 395 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 WFDC3Q8IUB2 231 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 OR52B4Q8NGK2 314 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 IL22RA2Q969J5 263 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 TMEM230Q96A57 120 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 TP53RKQ96S44 253 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 TSC22D3Q99576 134 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 TMEM222Q9H0R3 208 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 MLXQ9UH92 298 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 FBXL7Q9UJT9 491 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 SELENOKQ9Y6D0 94 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 PCLOQ9Y6V0 5065 aa10.13□□□□□ -0.79
SS18-222ENST00000582792 A0A0J9YWU9 116 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 TMEM213A2RRL7 107 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 MARCH11A6NNE9 402 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 A8MWP6 167 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 TEX22C9J3V5 150 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 UPK2O00526 184 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 NDUFB8O95169 186 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 CDS2O95674 445 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 IGKV1-39P01597 117 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 IGKV1D-39P04432 117 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 ANXA3P12429 323 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 ARL3P36405 182 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 CCR6P51684 374 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 EWSR1Q01844 656 aaKnown RBP eCLIP10.12□□□□□ -0.79
SS18-222ENST00000582792 TNFRSF9Q07011 255 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 ANKRD55Q3KP44 614 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 TMEM128Q5BJH2 165 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 OR4A47Q6IF82 309 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 MZT2BQ6NZ67 158 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 CEMP1Q6PRD7 247 aaPredicted RBP10.12□□□□□ -0.79
SS18-222ENST00000582792 DMBX1Q8NFW5 382 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 SEC22AQ96IW7 307 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 CCDC140Q96MF4 163 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 TMEM56Q96MV1 263 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 TMEM140Q9NV12 185 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 TBC1D24Q9ULP9 559 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 TMEM56-RWDD3S4R434 201 aa10.12□□□□□ -0.79
SS18-222ENST00000582792 LINC00854A0A1B0GVQ3 168 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms