RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 BEND2Q8NDZ0 799 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 OSR1Q8TAX0 266 aaPredicted RBP8.19□□□□□ -1.1
SS18-221ENST00000582448 DDB2Q92466 427 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 LHX4Q969G2 390 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 SMIM8Q96KF7 97 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 ZNF251Q9BRH9 671 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 MLST8Q9BVC4 326 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 HIPK2Q9H2X6 1198 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 ENY2Q9NPA8 101 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 FKBP11Q9NYL4 201 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 PSENENQ9NZ42 101 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 HSPB7Q9UBY9 170 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 FBXL17Q9UF56 701 aa8.19□□□□□ -1.1
SS18-221ENST00000582448 IGHV2-70DA0A0C4DH43 119 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 FAM24AA6NFZ4 105 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 A8MXK9 166 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 DFFBO76075 338 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 PRB2P02812 416 aaPredicted RBP8.18□□□□□ -1.1
SS18-221ENST00000582448 P0C879 139 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 COX7A1P24310 79 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 SULT1A1P50225 295 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 ZNF137PP52743 207 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 BRWD1-AS2P59051 145 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 ARF6P62330 175 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 IZUMO4Q1ZYL8 232 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 HLA-DRB5Q30154 266 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 CLLU1Q5K131 121 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 SLC25A24Q6NUK1 477 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 Q6YL49 198 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 C9orf139Q6ZV77 190 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 PDPNQ86YL7 162 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 PDZD9Q8IXQ8 264 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 OR4C13Q8NGP0 309 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 OR1S2Q8NGQ3 325 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 VSTM2AQ8TAG5 236 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 FLYWCH2Q96CP2 140 aaKnown RBP8.18□□□□□ -1.1
SS18-221ENST00000582448 TSNAXQ99598 290 aaKnown RBP8.18□□□□□ -1.1
SS18-221ENST00000582448 MRPL20Q9BYC9 149 aaKnown RBP8.18□□□□□ -1.1
SS18-221ENST00000582448 SMIM3Q9BZL3 60 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 SLC25A32Q9H2D1 315 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 RBKSQ9H477 322 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 TMEM140Q9NV12 185 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 PRNDQ9UKY0 176 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 WASHC3Q9Y3C0 194 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 KPTNQ9Y664 436 aa8.18□□□□□ -1.1
SS18-221ENST00000582448 LEUTXA8MZ59 168 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 BUB1B-PAK6H3BSN5 160 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 ATP6V1G1O75348 118 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 NDUFA7O95182 113 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 CFDP00746 253 aaPredicted RBP8.17□□□□□ -1.1
SS18-221ENST00000582448 IFNA5P01569 189 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 IAPPP10997 89 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 HTR1DP28221 377 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 LINC00205P59089 165 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 SPCS3P61009 180 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 RPS16P62249 146 aaKnown RBP8.17□□□□□ -1.1
SS18-221ENST00000582448 TOR2AQ5JU69 321 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 UTF1Q5T230 341 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 PNKDQ8N490 385 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 TMEM252Q8N6L7 170 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 OR52E5Q8NH55 327 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 DTD1Q8TEA8 209 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 RPEQ96AT9 228 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 HARBI1Q96MB7 349 aa8.17□□□□□ -1.1
SS18-221ENST00000582448 STRAPQ9Y3F4 350 aaKnown RBP8.17□□□□□ -1.1
SS18-221ENST00000582448 H0YJW9 148 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 VWFP04275 2813 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 ARG1P05089 322 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 FGF2P09038 288 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 S100A1P23297 94 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 LGALS7P47929 136 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 REG1BP48304 166 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 HOXA1P49639 335 aaPredicted RBP8.16□□□□□ -1.1
SS18-221ENST00000582448 OR2B8PP59922 312 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 NHLH2Q02577 135 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 PAX2Q02962 417 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 POU2AF1Q16633 256 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 VMA21Q3ZAQ7 101 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 SPANXN5Q5MJ07 72 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 RPL7L1Q6DKI1 246 aaKnown RBP8.16□□□□□ -1.1
SS18-221ENST00000582448 OR4A47Q6IF82 309 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 MOB3BQ86TA1 216 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 ZNF429Q86V71 674 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 C11orf42Q8N5U0 333 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 UBAC2Q8NBM4 344 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 OR11H6Q8NGC7 330 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 OR5C1Q8NGR4 320 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 OR4A5Q8NH83 315 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 LINC01006Q8NI28 216 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 SCGB1C1Q8TD33 95 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 NABP2Q9BQ15 211 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 QTRT1Q9BXR0 403 aaKnown RBP8.16□□□□□ -1.1
SS18-221ENST00000582448 C11orf1Q9H5F2 150 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 HEYLQ9NQ87 328 aaPredicted RBP8.16□□□□□ -1.1
SS18-221ENST00000582448 CYTL1Q9NRR1 136 aa8.16□□□□□ -1.1
SS18-221ENST00000582448 WNK1Q9H4A3 2382 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 IGSF23A1L1A6 192 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 C15orf61A6NNL5 157 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 G3V4G9 280 aa8.15□□□□□ -1.1
SS18-221ENST00000582448 H3BP45 60 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms