RNA–Protein interactions for RNA: ENST00000582293.1

RNF43-206, Transcript of ring finger protein 43, humanhuman

TSL 2

Gene RNF43, Length 324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-206ENST00000582293 INS-IGF2F8WCM5 200 aa12.63□□□□□ -0.39
RNF43-206ENST00000582293 G3V4G9 280 aa12.63□□□□□ -0.39
RNF43-206ENST00000582293 SLURP1P55000 103 aa12.63□□□□□ -0.39
RNF43-206ENST00000582293 SRPXP78539 464 aa12.63□□□□□ -0.39
RNF43-206ENST00000582293 ZNF616Q08AN1 781 aa12.63□□□□□ -0.39
RNF43-206ENST00000582293 DHRS2Q13268 280 aa12.63□□□□□ -0.39
RNF43-206ENST00000582293 C15orf32Q32M92 178 aa12.63□□□□□ -0.39
RNF43-206ENST00000582293 PDLIM3Q53GG5 364 aaPredicted RBP12.63□□□□□ -0.39
RNF43-206ENST00000582293 C11orf87Q6NUJ2 197 aa12.63□□□□□ -0.39
RNF43-206ENST00000582293 HSD17B13Q7Z5P4 300 aaPredicted RBP12.63□□□□□ -0.39
RNF43-206ENST00000582293 RNASE11Q8TAA1 199 aaKnown RBP12.63□□□□□ -0.39
RNF43-206ENST00000582293 F11RQ9Y624 299 aaKnown RBP12.63□□□□□ -0.39
RNF43-206ENST00000582293 S4R3C0 116 aa12.63□□□□□ -0.39
RNF43-206ENST00000582293 TRAV6A0A075B6T7 132 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 ANKRD34BA5PLL1 514 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 MFSD2BA6NFX1 497 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 HLA-AP01891 365 aaKnown RBP12.62□□□□□ -0.39
RNF43-206ENST00000582293 HSPB1P04792 205 aaKnown RBP12.62□□□□□ -0.39
RNF43-206ENST00000582293 IGLL1P15814 213 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 MECP2P51608 486 aaKnown RBP12.62□□□□□ -0.39
RNF43-206ENST00000582293 ATP5G2Q06055 141 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 EXOSC2Q13868 293 aaKnown RBP12.62□□□□□ -0.39
RNF43-206ENST00000582293 OXLD1Q5BKU9 147 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 SAMD5Q5TGI4 173 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 LYG2Q86SG7 212 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 OR52B4Q8NGK2 314 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 CCDC140Q96MF4 163 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.62□□□□□ -0.39
RNF43-206ENST00000582293 NUDT15Q9NV35 164 aa12.62□□□□□ -0.39
RNF43-206ENST00000582293 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.61□□□□□ -0.39
RNF43-206ENST00000582293 DUXBA0A1W2PPF3 345 aa12.61□□□□□ -0.39
RNF43-206ENST00000582293 LINC01619G3V211 115 aa12.61□□□□□ -0.39
RNF43-206ENST00000582293 PITX3O75364 302 aa12.61□□□□□ -0.39
RNF43-206ENST00000582293 IGHV3-23P01764 117 aa12.61□□□□□ -0.39
RNF43-206ENST00000582293 DEFA4P12838 97 aa12.61□□□□□ -0.39
RNF43-206ENST00000582293 HIST1H1BP16401 226 aaKnown RBP12.61□□□□□ -0.39
RNF43-206ENST00000582293 CD33P20138 364 aa12.61□□□□□ -0.39
RNF43-206ENST00000582293 ZNF114Q8NC26 417 aa12.61□□□□□ -0.39
RNF43-206ENST00000582293 OR52E5Q8NH55 327 aa12.61□□□□□ -0.39
RNF43-206ENST00000582293 DLX4Q92988 240 aaPredicted RBP12.61□□□□□ -0.39
RNF43-206ENST00000582293 FAM240BA0A1B0GVZ2 78 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 BMPR1BO00238 502 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 NXPH3O95157 252 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 DHFRP00374 187 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 IFNA17P01571 189 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 OR8U8P0C7N1 319 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 SULT1A3P0DMM9 295 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 SULT1A4P0DMN0 295 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 RAB25P57735 213 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 SPCS3P61009 180 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 BSXQ3C1V8 233 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 PVRIGQ6DKI7 326 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 C1QL4Q86Z23 238 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 DCUN1D4Q92564 292 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 PLEKHA3Q9HB20 300 aa12.6□□□□□ -0.39
RNF43-206ENST00000582293 PEF1Q9UBV8 284 aaKnown RBP12.6□□□□□ -0.39
RNF43-206ENST00000582293 MPTX1A8MV57 137 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 K7EIM0 57 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 ADAP1O75689 374 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 DUS4LO95620 317 aaKnown RBP12.59□□□□□ -0.39
RNF43-206ENST00000582293 HOXD3P31249 432 aaPredicted RBP12.59□□□□□ -0.39
RNF43-206ENST00000582293 SMCO1Q147U7 214 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 C4orf46Q504U0 113 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 GGNBP1Q5YKI7 109 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 SLC25A24Q6NUK1 477 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 MZT2BQ6NZ67 158 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 NRARPQ7Z6K4 114 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 OR1P1Q8NH06 330 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 DPF1Q92782 380 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 SEC22CQ9BRL7 303 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 RANGRFQ9HD47 186 aaPredicted RBP12.59□□□□□ -0.39
RNF43-206ENST00000582293 HSPB7Q9UBY9 170 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 DNAH3Q8TD57 4116 aa12.59□□□□□ -0.39
RNF43-206ENST00000582293 IGHV3-21A0A0B4J1V1 117 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 A0A1B0GU03 582 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 F8W735 103 aaPredicted RBP12.58□□□□□ -0.4
RNF43-206ENST00000582293 HOXB5P09067 269 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 H2AFB2P0C5Z0 115 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 RNASE2P10153 161 aaKnown RBP12.58□□□□□ -0.4
RNF43-206ENST00000582293 BEAN1Q3B7T3 259 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 KPRPQ5T749 579 aaPredicted RBP12.58□□□□□ -0.4
RNF43-206ENST00000582293 DUSP18Q8NEJ0 188 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 ZNF502Q8TBZ5 544 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 MITD1Q8WV92 249 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 TMEM170AQ8WVE7 144 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 RCC1LQ96I51 464 aaKnown RBP12.58□□□□□ -0.4
RNF43-206ENST00000582293 PDCD10Q9BUL8 212 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 TMED3Q9Y3Q3 217 aa12.58□□□□□ -0.4
RNF43-206ENST00000582293 MEGF8Q7Z7M0 2845 aa12.57□□□□□ -0.4
RNF43-206ENST00000582293 PPP5D1E7EU14 171 aa12.57□□□□□ -0.4
RNF43-206ENST00000582293 I3L2K1 104 aa12.57□□□□□ -0.4
RNF43-206ENST00000582293 SLC25A6P12236 298 aa12.57□□□□□ -0.4
RNF43-206ENST00000582293 HOXA1P49639 335 aaPredicted RBP12.57□□□□□ -0.4
RNF43-206ENST00000582293 ERHP84090 104 aaKnown RBP12.57□□□□□ -0.4
RNF43-206ENST00000582293 TNFRSF9Q07011 255 aa12.57□□□□□ -0.4
RNF43-206ENST00000582293 KLF5Q13887 457 aaPredicted RBP12.57□□□□□ -0.4
RNF43-206ENST00000582293 SCARB1Q8WTV0 552 aa12.57□□□□□ -0.4
RNF43-206ENST00000582293 EEF1AKMT3Q96AZ1 226 aa12.57□□□□□ -0.4
RNF43-206ENST00000582293 ZNF414Q96IQ9 312 aa12.57□□□□□ -0.4
RNF43-206ENST00000582293 CLEC19AQ6UXS0 136 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms