RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 C5orf66Q9H5L9 145 aa16.76■□□□□ 0.27
CASC3-207ENST00000581849 GAR1Q9NY12 217 aaKnown RBP16.76■□□□□ 0.27
CASC3-207ENST00000581849 FAM25AB3EWG3 89 aa16.75■□□□□ 0.27
CASC3-207ENST00000581849 FAM25CB3EWG5 89 aa16.75■□□□□ 0.27
CASC3-207ENST00000581849 FAM25GB3EWG6 89 aa16.75■□□□□ 0.27
CASC3-207ENST00000581849 NDUFA4O00483 81 aa16.75■□□□□ 0.27
CASC3-207ENST00000581849 WFDC10AQ9H1F0 79 aa16.75■□□□□ 0.27
CASC3-207ENST00000581849 DAZ1Q9NQZ3 744 aaKnown RBP16.75■□□□□ 0.27
CASC3-207ENST00000581849 OR2T8A6NH00 312 aa16.74■□□□□ 0.27
CASC3-207ENST00000581849 K7EIM0 57 aa16.74■□□□□ 0.27
CASC3-207ENST00000581849 RNASE10Q5GAN6 216 aaKnown RBP16.74■□□□□ 0.27
CASC3-207ENST00000581849 RBPMS2Q6ZRY4 209 aaKnown RBP16.74■□□□□ 0.27
CASC3-207ENST00000581849 H2BFWTQ7Z2G1 175 aa16.74■□□□□ 0.27
CASC3-207ENST00000581849 LHFPL1Q86WI0 220 aa16.74■□□□□ 0.27
CASC3-207ENST00000581849 ZNF114Q8NC26 417 aa16.74■□□□□ 0.27
CASC3-207ENST00000581849 OR4A16Q8NH70 328 aa16.74■□□□□ 0.27
CASC3-207ENST00000581849 IL17DQ8TAD2 202 aa16.74■□□□□ 0.27
CASC3-207ENST00000581849 SPAG8Q99932 426 aaPredicted RBP16.74■□□□□ 0.27
CASC3-207ENST00000581849 RYR2Q92736 4967 aa16.74■□□□□ 0.27
CASC3-207ENST00000581849 DBX1A6NMT0 343 aa16.73■□□□□ 0.27
CASC3-207ENST00000581849 F8W735 103 aaPredicted RBP16.73■□□□□ 0.27
CASC3-207ENST00000581849 K7EMT4 169 aa16.73■□□□□ 0.27
CASC3-207ENST00000581849 IGKV1-39P01597 117 aa16.73■□□□□ 0.27
CASC3-207ENST00000581849 IGKV1D-39P04432 117 aa16.73■□□□□ 0.27
CASC3-207ENST00000581849 FCGR2BP31994 310 aaPredicted RBP16.73■□□□□ 0.27
CASC3-207ENST00000581849 OR2C3Q8N628 320 aa16.73■□□□□ 0.27
CASC3-207ENST00000581849 NAA50Q9GZZ1 169 aaKnown RBP16.73■□□□□ 0.27
CASC3-207ENST00000581849 MTFP1Q9UDX5 166 aa16.73■□□□□ 0.27
CASC3-207ENST00000581849 STARD9Q9P2P6 4700 aa16.73■□□□□ 0.27
CASC3-207ENST00000581849 IGHV3-35A0A0C4DH35 117 aa16.72■□□□□ 0.27
CASC3-207ENST00000581849 M0QYG6 137 aa16.72■□□□□ 0.27
CASC3-207ENST00000581849 SCAF4O95104 1147 aaKnown RBP16.72■□□□□ 0.27
CASC3-207ENST00000581849 PRCDQ00LT1 54 aa16.72■□□□□ 0.27
CASC3-207ENST00000581849 EXTL2Q9UBQ6 330 aa16.72■□□□□ 0.27
CASC3-207ENST00000581849 KLK11Q9UBX7 282 aa16.72■□□□□ 0.27
CASC3-207ENST00000581849 SACSQ9NZJ4 4579 aa16.72■□□□□ 0.27
CASC3-207ENST00000581849 TSPAN4O14817 238 aa16.71■□□□□ 0.27
CASC3-207ENST00000581849 ADMP35318 185 aa16.71■□□□□ 0.27
CASC3-207ENST00000581849 HSPE1P61604 102 aaKnown RBP16.71■□□□□ 0.27
CASC3-207ENST00000581849 GPR107Q5VW38 600 aa16.71■□□□□ 0.27
CASC3-207ENST00000581849 ZFAND6Q6FIF0 208 aa16.71■□□□□ 0.27
CASC3-207ENST00000581849 OR52I2Q8NH67 350 aa16.71■□□□□ 0.27
CASC3-207ENST00000581849 MRGPRFQ96AM1 343 aa16.71■□□□□ 0.27
CASC3-207ENST00000581849 TXN2Q99757 166 aa16.71■□□□□ 0.27
CASC3-207ENST00000581849 CHRDL1Q9BU40 450 aa16.71■□□□□ 0.27
CASC3-207ENST00000581849 GGTLC1Q9BX51 225 aa16.71■□□□□ 0.27
CASC3-207ENST00000581849 RETNQ9HD89 108 aa16.71■□□□□ 0.27
CASC3-207ENST00000581849 CSMD3Q7Z407 3707 aa16.7■□□□□ 0.26
CASC3-207ENST00000581849 LCE6AA0A183 80 aa16.7■□□□□ 0.26
CASC3-207ENST00000581849 C15orf62A8K5M9 175 aa16.7■□□□□ 0.26
CASC3-207ENST00000581849 ATG12O94817 140 aa16.7■□□□□ 0.26
CASC3-207ENST00000581849 RELQ04864 619 aaPredicted RBP16.7■□□□□ 0.26
CASC3-207ENST00000581849 Q56UQ5 140 aa16.7■□□□□ 0.26
CASC3-207ENST00000581849 LAMTOR1Q6IAA8 161 aa16.7■□□□□ 0.26
CASC3-207ENST00000581849 TENM2Q9NT68 2774 aa16.7■□□□□ 0.26
CASC3-207ENST00000581849 LOC102724200A0A096LPH7 203 aaPredicted RBP16.69■□□□□ 0.26
CASC3-207ENST00000581849 CD74P04233 296 aa16.69■□□□□ 0.26
CASC3-207ENST00000581849 CD3DP04234 171 aa16.69■□□□□ 0.26
CASC3-207ENST00000581849 CTSGP08311 255 aa16.69■□□□□ 0.26
CASC3-207ENST00000581849 PGAM2P15259 253 aa16.69■□□□□ 0.26
CASC3-207ENST00000581849 PIGPP57054 158 aa16.69■□□□□ 0.26
CASC3-207ENST00000581849 SSBP1Q04837 148 aaKnown RBP16.69■□□□□ 0.26
CASC3-207ENST00000581849 TMEM229BQ8NBD8 167 aa16.69■□□□□ 0.26
CASC3-207ENST00000581849 ABHD1Q96SE0 405 aa16.69■□□□□ 0.26
CASC3-207ENST00000581849 MRPS26Q9BYN8 205 aaKnown RBP16.69■□□□□ 0.26
CASC3-207ENST00000581849 SELENOKQ9Y6D0 94 aa16.69■□□□□ 0.26
CASC3-207ENST00000581849 IGHV3-21A0A0B4J1V1 117 aa16.68■□□□□ 0.26
CASC3-207ENST00000581849 INS-IGF2F8WCM5 200 aa16.68■□□□□ 0.26
CASC3-207ENST00000581849 I3L2K1 104 aa16.68■□□□□ 0.26
CASC3-207ENST00000581849 NUPL2O15504 423 aaKnown RBP16.68■□□□□ 0.26
CASC3-207ENST00000581849 B3GALNT1O75752 331 aa16.68■□□□□ 0.26
CASC3-207ENST00000581849 MFAP4P55083 255 aa16.68■□□□□ 0.26
CASC3-207ENST00000581849 TAS2R19P59542 299 aa16.68■□□□□ 0.26
CASC3-207ENST00000581849 MRPS10P82664 201 aaKnown RBP16.68■□□□□ 0.26
CASC3-207ENST00000581849 ERHP84090 104 aaKnown RBP16.68■□□□□ 0.26
CASC3-207ENST00000581849 UBAC2Q8NBM4 344 aa16.68■□□□□ 0.26
CASC3-207ENST00000581849 FAM110AQ9BQ89 295 aa16.68■□□□□ 0.26
CASC3-207ENST00000581849 P0C879 139 aa16.67■□□□□ 0.26
CASC3-207ENST00000581849 ALDH3B2P48448 385 aa16.67■□□□□ 0.26
CASC3-207ENST00000581849 RNASE12Q5GAN4 147 aaKnown RBP16.67■□□□□ 0.26
CASC3-207ENST00000581849 CCDC71LQ8N9Z2 235 aa16.67■□□□□ 0.26
CASC3-207ENST00000581849 TERB2Q8NHR7 220 aa16.67■□□□□ 0.26
CASC3-207ENST00000581849 ZFAND1Q8TCF1 268 aa16.67■□□□□ 0.26
CASC3-207ENST00000581849 C20orf24Q9BUV8 137 aa16.67■□□□□ 0.26
CASC3-207ENST00000581849 GABARAPH6UMI1 98 aa16.66■□□□□ 0.26
CASC3-207ENST00000581849 GPR141Q7Z602 305 aa16.66■□□□□ 0.26
CASC3-207ENST00000581849 MISP3Q96FF7 219 aa16.66■□□□□ 0.26
CASC3-207ENST00000581849 OR10C1Q96KK4 312 aa16.66■□□□□ 0.26
CASC3-207ENST00000581849 TP53RKQ96S44 253 aa16.66■□□□□ 0.26
CASC3-207ENST00000581849 C3orf85A0A1B0GTC6 90 aa16.65■□□□□ 0.26
CASC3-207ENST00000581849 OR4C46A6NHA9 309 aa16.65■□□□□ 0.26
CASC3-207ENST00000581849 MT-CO2P00403 227 aa16.65■□□□□ 0.26
CASC3-207ENST00000581849 IGKV1-5P01602 117 aa16.65■□□□□ 0.26
CASC3-207ENST00000581849 PI3P19957 117 aa16.65■□□□□ 0.26
CASC3-207ENST00000581849 AKR1C2P52895 323 aa16.65■□□□□ 0.26
CASC3-207ENST00000581849 NXF2Q9GZY0 626 aaKnown RBP16.65■□□□□ 0.26
CASC3-207ENST00000581849 COPZ2Q9P299 210 aa16.65■□□□□ 0.26
CASC3-207ENST00000581849 RABL2AQ9UBK7 228 aaPredicted RBP16.65■□□□□ 0.26
CASC3-207ENST00000581849 SMPXQ9UHP9 88 aa16.65■□□□□ 0.26
CASC3-207ENST00000581849 RABL2BQ9UNT1 228 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms