RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 CEP192Q8TEP8 1941 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 RAB2BQ8WUD1 216 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TOPBP1Q92547 1522 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 SFRP2Q96HF1 295 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 ABCC12Q96J65 1359 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 NMNAT3Q96T66 252 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 DOHHQ9BU89 302 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 C20orf27Q9GZN8 174 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 CYSTM1Q9H1C7 97 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TLNRD1Q9H1K6 362 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 RNF122Q9H9V4 155 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 ZNF532Q9HCE3 1301 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 PLXNA4Q9HCM2 1894 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 XPNPEP1Q9NQW7 623 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 C8orf4Q9NR00 106 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 HHLA3Q9XRX5 114 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 ARL2BPQ9Y2Y0 163 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 RBM7Q9Y580 266 aaKnown RBP0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM56-RWDD3S4R434 201 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 NOTCH1P46531 2555 aa0.51□□□□□ -2.33
SMCHD1-206ENST00000581631 DIDO1Q9BTC0 2240 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 MYO18AQ92614 2054 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 NUP98P52948 1817 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 PIK3C2AO00443 1686 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 NEO1Q92859 1461 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 RIC1Q4ADV7 1423 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 ADGRL3Q9HAR2 1447 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 TRBV20OR9-2A0A075B6H5 130 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 FUOMA2VDF0 154 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 FABP5P3A8MUU1 101 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 LST1O00453 97 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 SLC22A1O15245 554 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 PLA2G10O15496 165 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 CHP2O43745 196 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 FADS1O60427 444 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 OR2B3O76000 313 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 TCL1BO95988 128 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HAND1O96004 215 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 SERPINA1P01009 418 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HLA-DRB1P01911 266 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 C1QCP02747 245 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 SERPINA7P05543 415 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 RPS17P08708 135 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 RBP1P09455 135 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 CTXN2P0C2S0 81 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 METTL15P1P0C7V9 234 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 SULT1A3P0DMM9 295 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 SULT1A4P0DMN0 295 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 CCL1P22362 96 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST1H1TP22492 207 aaPredicted RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST1H2BOP23527 126 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 MSNP26038 577 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 S100A7P31151 101 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HOXA6P31267 233 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST1H2BBP33778 126 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 MAP2K4P45985 399 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 RAB13P51153 203 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 FXYD2P54710 66 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST1H2BDP58876 126 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 AP3S2P59780 193 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 MYL6P60660 151 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM258P61165 79 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 ARF6P62330 175 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST1H2BCP62807 126 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 CCL20P78556 96 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 ITGB3BPQ13352 177 aaPredicted RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST2H2BEQ16778 126 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 LIN52Q52LA3 116 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 TNFAIP8L3Q5GJ75 292 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 SPANXN3Q5MJ09 141 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 IBA57Q5T440 356 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 DEFB128Q7Z7B8 93 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 OOSP2Q86WS3 158 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 UMODL1-AS1Q8N2C9 162 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM86AQ8N2M4 240 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 RPP25LQ8N5L8 163 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 TMEM86BQ8N661 226 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 OR5B17Q8NGF7 314 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 OR13C4Q8NGS5 318 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 CT55Q8WUE5 264 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 ACOT12Q8WYK0 555 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 ANKRD7Q92527 254 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST1H2BHQ93079 126 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 ITFG2Q969R8 447 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST1H2BNQ99877 126 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 HIST1H2BMQ99879 126 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 ULBP3Q9BZM4 244 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 WDR61Q9GZS3 305 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 CHST6Q9GZX3 395 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 MIXL1Q9H2W2 232 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 PSTPIP2Q9H939 334 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 EFCAB1Q9HAE3 211 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 NMNAT1Q9HAN9 279 aaPredicted RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 NHP2Q9NX24 153 aaKnown RBP0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 GLTPQ9NZD2 209 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 IL36BQ9NZH7 164 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 FUT9Q9Y231 359 aa0.5□□□□□ -2.33
SMCHD1-206ENST00000581631 V9GYY5 206 aaPredicted RBP0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms