RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 CDNFQ49AH0 187 aa9.19□□□□□ -0.94
SS18-219ENST00000581570 TMEM41BQ5BJD5 291 aa9.19□□□□□ -0.94
SS18-219ENST00000581570 ZNF767PQ75MW2 155 aa9.19□□□□□ -0.94
SS18-219ENST00000581570 GIMAP1Q8WWP7 306 aa9.19□□□□□ -0.94
SS18-219ENST00000581570 DGCR14Q96DF8 476 aaKnown RBP9.19□□□□□ -0.94
SS18-219ENST00000581570 ZNF414Q96IQ9 312 aa9.19□□□□□ -0.94
SS18-219ENST00000581570 OR10C1Q96KK4 312 aa9.19□□□□□ -0.94
SS18-219ENST00000581570 CCL28Q9NRJ3 127 aa9.19□□□□□ -0.94
SS18-219ENST00000581570 X6R8D5 127 aa9.19□□□□□ -0.94
SS18-219ENST00000581570 TEX50A0A1B0GTY4 177 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 PTGES3LE9PB15 166 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 SULT1C2O00338 296 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 RBFOX2O43251 390 aaKnown RBP eCLIP9.18□□□□□ -0.94
SS18-219ENST00000581570 CDK2AP2O75956 126 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 HPRT1P00492 218 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 IFNA21P01568 189 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 IFNA17P01571 189 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 CD5P06127 495 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 EIF4EP06730 217 aaKnown RBP9.18□□□□□ -0.94
SS18-219ENST00000581570 LCE2AQ5TA79 106 aaPredicted RBP9.18□□□□□ -0.94
SS18-219ENST00000581570 Q6ZR54 194 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 DMBX1Q8NFW5 382 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 OR1L8Q8NGR8 309 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 SECTM1Q8WVN6 248 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 SCRT1Q9BWW7 348 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 HINT2Q9BX68 163 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 ATG5Q9H1Y0 275 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 DCSTAMPQ9H295 470 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 MS4A6AQ9H2W1 248 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 TMEM140Q9NV12 185 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 CELA1Q9UNI1 258 aa9.18□□□□□ -0.94
SS18-219ENST00000581570 C16orf90A8MZG2 172 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 ST8SIA3O43173 380 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 FGF2P09038 288 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 HSMCR30P0CW71 290 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 SPP1P10451 314 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 PSMA1P25786 263 aaKnown RBP9.17□□□□□ -0.94
SS18-219ENST00000581570 RPL11P62913 178 aaKnown RBP9.17□□□□□ -0.94
SS18-219ENST00000581570 FABP5Q01469 135 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 HACD4Q5VWC8 232 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 MORN3Q6PF18 240 aaPredicted RBP9.17□□□□□ -0.94
SS18-219ENST00000581570 TRPT1Q86TN4 253 aaKnown RBP9.17□□□□□ -0.94
SS18-219ENST00000581570 UBE2DNLQ8IWF7 75 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 FAM24BQ8N5W8 94 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 DUSP18Q8NEJ0 188 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 TBC1D24Q9ULP9 559 aa9.17□□□□□ -0.94
SS18-219ENST00000581570 TRAV2A0A0B4J234 112 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 PDCD5O14737 125 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 C4BPBP20851 252 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 NPY1RP25929 384 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 OR10A3P58181 314 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 CATR1Q13166 79 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 MSMO1Q15800 293 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 C1orf134Q5TEV5 83 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 ZNF773Q6PK81 442 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 Q6ZRM9 215 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 LILRB2Q8N423 598 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 PACRGLQ8N7B6 248 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 ZBTB34Q8NCN2 500 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 NUDCD2Q8WVJ2 157 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 ST8SIA2Q92186 375 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 LSM10Q969L4 123 aaKnown RBP9.16□□□□□ -0.94
SS18-219ENST00000581570 C8orf4Q9NR00 106 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 NDUFA4L2Q9NRX3 87 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 CLEC5AQ9NY25 188 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 ANXA10Q9UJ72 324 aa9.16□□□□□ -0.94
SS18-219ENST00000581570 IFITM5A6NNB3 132 aa9.15□□□□□ -0.94
SS18-219ENST00000581570 APOHP02749 345 aaPredicted RBP9.15□□□□□ -0.94
SS18-219ENST00000581570 FCGR2CP31995 323 aa9.15□□□□□ -0.94
SS18-219ENST00000581570 MFAP4P55083 255 aa9.15□□□□□ -0.94
SS18-219ENST00000581570 SLC25A46Q96AG3 418 aa9.15□□□□□ -0.94
SS18-219ENST00000581570 GINS3Q9BRX5 216 aa9.15□□□□□ -0.94
SS18-219ENST00000581570 NXF2Q9GZY0 626 aaKnown RBP9.15□□□□□ -0.94
SS18-219ENST00000581570 VSIRQ9H7M9 311 aa9.15□□□□□ -0.94
SS18-219ENST00000581570 PLEKHA2Q9HB19 425 aa9.15□□□□□ -0.94
SS18-219ENST00000581570 TMEM14BQ9NUH8 114 aa9.15□□□□□ -0.94
SS18-219ENST00000581570 RABAC1Q9UI14 185 aa9.15□□□□□ -0.94
SS18-219ENST00000581570 LRP1BQ9NZR2 4599 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 IGHV3-66A0A0C4DH42 116 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 KNCNA6PVL3 124 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 CD74P04233 296 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 ERVK-16P61578 105 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 OR13F1Q8NGS4 319 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 OR51H1Q8NH63 302 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 TXN2Q99757 166 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 SLC5A7Q9GZV3 580 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 ACOT13Q9NPJ3 140 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 OR51B2Q9Y5P1 312 aa9.14□□□□□ -0.95
SS18-219ENST00000581570 TRAV1-2A0A0B4J238 106 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 TMEM235A6NFC5 223 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 I3L2K1 104 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 SSX5O60225 188 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 PPYP01298 95 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 GNG2P59768 71 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 ARPC4P59998 168 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 MLLT11Q13015 90 aaPredicted RBP9.13□□□□□ -0.95
SS18-219ENST00000581570 UBE2UQ5VVX9 321 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 TOMM20LQ6UXN7 152 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 Q8N1X5 172 aa9.13□□□□□ -0.95
SS18-219ENST00000581570 CSNK1G2-AS1Q8NCQ2 148 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms