RNA–Protein interactions for RNA: ENST00000581039.1

RFFL-208, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 424 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-208ENST00000581039 VCXQ9H320 206 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 DUSP21Q9H596 190 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 PLEKHA2Q9HB19 425 aa7.22□□□□□ -1.25
RFFL-208ENST00000581039 FAT2Q9NYQ8 4349 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 IGHV4-28A0A0C4DH34 117 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 K7EIM0 57 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 M0R2N4 97 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 RTL8CO15255 209 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 SSX5O60225 188 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 SCGNO76038 276 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 DFFBO76075 338 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 PPYP01298 95 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 EIF4EP06730 217 aaKnown RBP7.21□□□□□ -1.26
RFFL-208ENST00000581039 RBMY1A1P0DJD3 496 aaKnown RBP7.21□□□□□ -1.26
RFFL-208ENST00000581039 RBMY1CP0DJD4 496 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 P0DMU3 169 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 FAM231AP0DMU4 169 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 FAM231CP0DMU5 169 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 MIFP14174 115 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 DEFB131AP59861 70 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 RPL11P62913 178 aaKnown RBP7.21□□□□□ -1.26
RFFL-208ENST00000581039 RBMY1FQ15415 496 aaKnown RBP7.21□□□□□ -1.26
RFFL-208ENST00000581039 TMEM41BQ5BJD5 291 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 OGFRL1Q5TC84 451 aaPredicted RBP7.21□□□□□ -1.26
RFFL-208ENST00000581039 AADACL3Q5VUY0 350 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 ZNF773Q6PK81 442 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 Q6ZTC4 211 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 STHQ8IWL8 128 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 OR51H1Q8NH63 302 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 NDUFA4L2Q9NRX3 87 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 DNAH2Q9P225 4427 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 DNAH6Q9C0G6 4158 aa7.21□□□□□ -1.26
RFFL-208ENST00000581039 SNAPC5O75971 98 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 PTHLHP12272 177 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 MFAP4P55083 255 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 FXYD4P59646 89 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 DUSP18Q8NEJ0 188 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 BEST4Q8NFU0 473 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 GIMAP1Q8WWP7 306 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 SLC25A46Q96AG3 418 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 TMEM56Q96MV1 263 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 TXN2Q99757 166 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 GINS3Q9BRX5 216 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 NXF2Q9GZY0 626 aaKnown RBP7.2□□□□□ -1.26
RFFL-208ENST00000581039 MS4A6AQ9H2W1 248 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 COMMD9Q9P000 198 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 OR51B2Q9Y5P1 312 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 PKHD1P08F94 4074 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 DNAH11Q96DT5 4516 aa7.2□□□□□ -1.26
RFFL-208ENST00000581039 DYNC1H1Q14204 4646 aaKnown RBP7.19□□□□□ -1.26
RFFL-208ENST00000581039 DEFB131BA0A096LNP1 70 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 TRDV1A0A1B0GX56 115 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 MARCH11A6NNE9 402 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 ST8SIA3O43173 380 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 MORN3Q6PF18 240 aaPredicted RBP7.19□□□□□ -1.26
RFFL-208ENST00000581039 ZNF818PQ6ZRF7 136 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 PRSS48Q7RTY5 328 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 OR1P1Q8NH06 330 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 MISP3Q96FF7 219 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 NDUFAF3Q9BU61 184 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 KRTAP4-5Q9BYR2 181 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 FKBP11Q9NYL4 201 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 RABAC1Q9UI14 185 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 NSG2Q9Y328 171 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 DNAH17Q9UFH2 4485 aa7.19□□□□□ -1.26
RFFL-208ENST00000581039 ELOA3CA0A087WX78 387 aaPredicted RBP7.18□□□□□ -1.26
RFFL-208ENST00000581039 TRAV2A0A0B4J234 112 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 SMIM30A4D0T7 59 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 NOTOA8MTQ0 251 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 ZNF705EA8MWA4 302 aaPredicted RBP7.18□□□□□ -1.26
RFFL-208ENST00000581039 EBAG9O00559 213 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 GNG7O60262 68 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 KRASP01116 189 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 GIG44P09565 113 aaPredicted RBP7.18□□□□□ -1.26
RFFL-208ENST00000581039 SPP1P10451 314 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 F2RP25116 425 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 LPAR6P43657 344 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 LGALS9BQ3B8N2 356 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 C22orf42Q6IC83 251 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 TPRA1Q86W33 373 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 TMEM17Q86X19 198 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 HOGA1Q86XE5 327 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 LILRB2Q8N423 598 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 TSPAN14Q8NG11 270 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 ST8SIA2Q92186 375 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 BORCS5Q969J3 196 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 ZNF414Q96IQ9 312 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 VSIRQ9H7M9 311 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 PRNDQ9UKY0 176 aa7.18□□□□□ -1.26
RFFL-208ENST00000581039 TRAV18A0A075B6X5 111 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 IGHV3-66A0A0C4DH42 116 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 I3L2K1 104 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 IFNA10P01566 189 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 IFNA21P01568 189 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 IFNA17P01571 189 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 IGHV3-48P01763 117 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 APOHP02749 345 aaPredicted RBP7.17□□□□□ -1.26
RFFL-208ENST00000581039 AMBPP02760 352 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 NPY1RP25929 384 aa7.17□□□□□ -1.26
RFFL-208ENST00000581039 G6PCP35575 357 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms