RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 FGL1Q08830 312 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 FCN2Q15485 313 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 C2orf68Q2NKX9 166 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 TMEM95Q3KNT9 176 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 KRTAP24-1Q3LI83 254 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 CTRB2Q6GPI1 263 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 OR1P1Q8NH06 330 aa11.21□□□□□ -0.61
SKA2-205ENST00000580541 ZNF436Q9C0F3 470 aaPredicted RBP11.21□□□□□ -0.61
SKA2-205ENST00000580541 CUBNO60494 3623 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 CGB1A6NKQ9 187 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 FBXO24O75426 580 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 NXPH3O95157 252 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 SIX6O95475 246 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 IFNA10P01566 189 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 IGLV1-40P01703 118 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 MBPP02686 304 aaPredicted RBP11.2□□□□□ -0.62
SKA2-205ENST00000580541 APELAP0DMC3 54 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 PF4V1P10720 104 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 AREGP15514 252 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 H2BFSP57053 126 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 PROK1P58294 105 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 RAB11AP62491 216 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 RPL23AP62750 156 aaKnown RBP11.2□□□□□ -0.62
SKA2-205ENST00000580541 WT1-ASQ06250 92 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 C19orf54Q5BKX5 351 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 SPINK9Q5DT21 86 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 SLC25A24Q6NUK1 477 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 ZNF329Q86UD4 541 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 ZNF114Q8NC26 417 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 USMG5Q96IX5 58 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 SMIM8Q96KF7 97 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 MAGT1Q9H0U3 335 aa11.2□□□□□ -0.62
SKA2-205ENST00000580541 F11RQ9Y624 299 aaKnown RBP11.2□□□□□ -0.62
SKA2-205ENST00000580541 A0A1B0GW64 132 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 SCAF4O95104 1147 aaKnown RBP11.19□□□□□ -0.62
SKA2-205ENST00000580541 GIPP09681 153 aaPredicted RBP11.19□□□□□ -0.62
SKA2-205ENST00000580541 RAB9AP51151 201 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 S100A10P60903 97 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 RAP2BP61225 183 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 POLR2GP62487 172 aaKnown RBP eCLIP11.19□□□□□ -0.62
SKA2-205ENST00000580541 CFHR3Q02985 330 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 IL15RAQ13261 267 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 AWAT1Q58HT5 328 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 FAM209BQ5JX69 171 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 ASPHD1Q5U4P2 390 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 C12orf54Q6X4T0 127 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 NECAP1Q8NC96 275 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 SLC24A4Q8NFF2 622 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 OR11H7Q8NGC8 314 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 WFDC12Q8WWY7 111 aa11.19□□□□□ -0.62
SKA2-205ENST00000580541 STRAPQ9Y3F4 350 aaKnown RBP11.19□□□□□ -0.62
SKA2-205ENST00000580541 LSM5Q9Y4Y9 91 aaKnown RBP11.19□□□□□ -0.62
SKA2-205ENST00000580541 FAM223BA6NKX1 122 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 K7EPK0 472 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 SSSCA1O60232 199 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 TRGV3P03979 118 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 REG1AP05451 166 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 CXCL3P19876 107 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 PSMB8P28062 276 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 RAB32Q13637 225 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 EXOSC2Q13868 293 aaKnown RBP11.18□□□□□ -0.62
SKA2-205ENST00000580541 C2orf83Q53S99 150 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 FAM223AQ8IWN6 122 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 THAP6Q8TBB0 222 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 PPP1R1CQ8WVI7 109 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 TAF15Q92804 592 aaKnown RBP eCLIP11.18□□□□□ -0.62
SKA2-205ENST00000580541 P2RX4Q99571 388 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 PSENENQ9NZ42 101 aa11.18□□□□□ -0.62
SKA2-205ENST00000580541 RPS10-NUDT3A0A1W2PQS6 291 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 TCRBV4S1A1TA0A5B7 111 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 E5RGE8 158 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 TSC22D2O75157 780 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 IFNA4P05014 189 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 IAPPP10997 89 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 NPY1RP25929 384 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 TPPP2P59282 170 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 ATP5G2Q06055 141 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 KLK9Q2XQG4 91 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 ETFRF1Q6IPR1 90 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 C3orf56Q8N813 242 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 RNASEH2CQ8TDP1 164 aaKnown RBP11.17□□□□□ -0.62
SKA2-205ENST00000580541 CXorf58Q96LI9 332 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 MS4A10Q96PG2 267 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 KLK9Q9UKQ9 250 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 ATRQ13535 2644 aa11.17□□□□□ -0.62
SKA2-205ENST00000580541 TRBV9A0A0B4J1U6 114 aa11.16□□□□□ -0.62
SKA2-205ENST00000580541 DEDDO75618 318 aa11.16□□□□□ -0.62
SKA2-205ENST00000580541 MPC2O95563 127 aa11.16□□□□□ -0.62
SKA2-205ENST00000580541 OR8U8P0C7N1 319 aa11.16□□□□□ -0.62
SKA2-205ENST00000580541 RNASE2P10153 161 aaKnown RBP11.16□□□□□ -0.62
SKA2-205ENST00000580541 BCAP31P51572 246 aa11.16□□□□□ -0.62
SKA2-205ENST00000580541 RHOGP84095 191 aa11.16□□□□□ -0.62
SKA2-205ENST00000580541 BSXQ3C1V8 233 aa11.16□□□□□ -0.62
SKA2-205ENST00000580541 LRRC37A5PQ49AS3 106 aa11.16□□□□□ -0.62
SKA2-205ENST00000580541 SPANXN5Q5MJ07 72 aa11.16□□□□□ -0.62
SKA2-205ENST00000580541 WIPF2Q8TF74 440 aaPredicted RBP11.16□□□□□ -0.62
SKA2-205ENST00000580541 UBE2E2Q96LR5 201 aa11.16□□□□□ -0.62
SKA2-205ENST00000580541 GAR1Q9NY12 217 aaKnown RBP11.16□□□□□ -0.62
SKA2-205ENST00000580541 FBXL7Q9UJT9 491 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 81.6 ms