RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 CENPXA8MT69 81 aa12.6□□□□□ -0.39
IFT20-210ENST00000580357 GGCTO75223 188 aaKnown RBP12.6□□□□□ -0.39
IFT20-210ENST00000580357 SAP30O75446 220 aa12.6□□□□□ -0.39
IFT20-210ENST00000580357 IGKV1-5P01602 117 aa12.6□□□□□ -0.39
IFT20-210ENST00000580357 P0C879 139 aa12.6□□□□□ -0.39
IFT20-210ENST00000580357 KRTAP10-11P60412 298 aa12.6□□□□□ -0.39
IFT20-210ENST00000580357 PRCDQ00LT1 54 aa12.6□□□□□ -0.39
IFT20-210ENST00000580357 PEMTQ9UBM1 199 aa12.6□□□□□ -0.39
IFT20-210ENST00000580357 TMEM56-RWDD3S4R434 201 aa12.6□□□□□ -0.39
IFT20-210ENST00000580357 A0A0B4J293 547 aa12.59□□□□□ -0.39
IFT20-210ENST00000580357 PRB2P02812 416 aaPredicted RBP12.59□□□□□ -0.39
IFT20-210ENST00000580357 AKR1C4P17516 323 aa12.59□□□□□ -0.39
IFT20-210ENST00000580357 SRPXP78539 464 aa12.59□□□□□ -0.39
IFT20-210ENST00000580357 DEFA5Q01523 94 aa12.59□□□□□ -0.39
IFT20-210ENST00000580357 TMEM128Q5BJH2 165 aa12.59□□□□□ -0.39
IFT20-210ENST00000580357 SELENOHQ8IZQ5 122 aaKnown RBP12.59□□□□□ -0.39
IFT20-210ENST00000580357 OR9G4Q8NGQ1 327 aa12.59□□□□□ -0.39
IFT20-210ENST00000580357 OR1P1Q8NH06 330 aa12.59□□□□□ -0.39
IFT20-210ENST00000580357 MRAPQ8TCY5 172 aa12.59□□□□□ -0.39
IFT20-210ENST00000580357 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.59□□□□□ -0.39
IFT20-210ENST00000580357 DBX1A6NMT0 343 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 INS-IGF2F8WCM5 200 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 IFNA17P01571 189 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 SYNJ2BPP57105 145 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 TMEM187Q14656 261 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 FAM106AQ4KMX7 169 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 GPHB5Q86YW7 130 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 OR2C3Q8N628 320 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 C7orf50Q9BRJ6 194 aaKnown RBP12.58□□□□□ -0.4
IFT20-210ENST00000580357 PLEKHA3Q9HB20 300 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 ENY2Q9NPA8 101 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 SIGLEC8Q9NYZ4 499 aa12.58□□□□□ -0.4
IFT20-210ENST00000580357 A6NHS1 94 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 BMPR1BO00238 502 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 TRBV12-3P01733 135 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 CLEC3BP05452 202 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 ARL3P36405 182 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 SNCAP37840 140 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 SUB1P53999 127 aaKnown RBP eCLIP12.57□□□□□ -0.4
IFT20-210ENST00000580357 RBMS2Q15434 407 aaKnown RBP12.57□□□□□ -0.4
IFT20-210ENST00000580357 BAK1Q16611 211 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 CNPY1Q3B7I2 92 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 TMEM268Q5VZI3 342 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 CLEC19AQ6UXS0 136 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 C19orf35Q6ZS72 473 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 LGI3Q8N145 548 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 SLC35G3Q8N808 338 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 OR52E5Q8NH55 327 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 TMEM230Q96A57 120 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 BATF3Q9NR55 127 aa12.57□□□□□ -0.4
IFT20-210ENST00000580357 GAR1Q9NY12 217 aaKnown RBP12.57□□□□□ -0.4
IFT20-210ENST00000580357 LGALS9O00182 355 aa12.56□□□□□ -0.4
IFT20-210ENST00000580357 ST8SIA3O43173 380 aa12.56□□□□□ -0.4
IFT20-210ENST00000580357 SPCS3P61009 180 aa12.56□□□□□ -0.4
IFT20-210ENST00000580357 IZUMO4Q1ZYL8 232 aa12.56□□□□□ -0.4
IFT20-210ENST00000580357 AARDQ4LEZ3 155 aa12.56□□□□□ -0.4
IFT20-210ENST00000580357 DEFB121Q5J5C9 76 aa12.56□□□□□ -0.4
IFT20-210ENST00000580357 ZNF114Q8NC26 417 aa12.56□□□□□ -0.4
IFT20-210ENST00000580357 ZNF502Q8TBZ5 544 aa12.56□□□□□ -0.4
IFT20-210ENST00000580357 ZNF256Q9Y2P7 627 aaPredicted RBP12.56□□□□□ -0.4
IFT20-210ENST00000580357 DMRT1Q9Y5R6 373 aa12.56□□□□□ -0.4
IFT20-210ENST00000580357 A0A0B4J2A0 478 aa12.55□□□□□ -0.4
IFT20-210ENST00000580357 DUXBA0A1W2PPF3 345 aa12.55□□□□□ -0.4
IFT20-210ENST00000580357 UBE2MP61081 183 aaKnown RBP12.55□□□□□ -0.4
IFT20-210ENST00000580357 SPSB3Q6PJ21 355 aa12.55□□□□□ -0.4
IFT20-210ENST00000580357 TMED4Q7Z7H5 227 aa12.55□□□□□ -0.4
IFT20-210ENST00000580357 LHFPL5Q8TAF8 219 aa12.55□□□□□ -0.4
IFT20-210ENST00000580357 S100ZQ8WXG8 99 aa12.55□□□□□ -0.4
IFT20-210ENST00000580357 GPR146Q96CH1 333 aa12.55□□□□□ -0.4
IFT20-210ENST00000580357 CCDC140Q96MF4 163 aa12.55□□□□□ -0.4
IFT20-210ENST00000580357 SDHCQ99643 169 aaPredicted RBP12.55□□□□□ -0.4
IFT20-210ENST00000580357 TXN2Q99757 166 aa12.55□□□□□ -0.4
IFT20-210ENST00000580357 SHPKQ9UHJ6 478 aa12.55□□□□□ -0.4
IFT20-210ENST00000580357 WI2-2373I1.2A0A1W2PRP0 233 aa12.54□□□□□ -0.4
IFT20-210ENST00000580357 K7EIL1 84 aa12.54□□□□□ -0.4
IFT20-210ENST00000580357 CORTO00230 105 aa12.54□□□□□ -0.4
IFT20-210ENST00000580357 OR2C1O95371 312 aa12.54□□□□□ -0.4
IFT20-210ENST00000580357 IGHV3-23P01764 117 aa12.54□□□□□ -0.4
IFT20-210ENST00000580357 SUPT4H1P63272 117 aaKnown RBP12.54□□□□□ -0.4
IFT20-210ENST00000580357 PLET1Q6UQ28 207 aa12.54□□□□□ -0.4
IFT20-210ENST00000580357 CENPSQ8N2Z9 138 aa12.54□□□□□ -0.4
IFT20-210ENST00000580357 BSCL2Q96G97 398 aaPredicted RBP12.54□□□□□ -0.4
IFT20-210ENST00000580357 PALMDQ9NP74 551 aa12.54□□□□□ -0.4
IFT20-210ENST00000580357 C21orf62Q9NYP8 219 aa12.54□□□□□ -0.4
IFT20-210ENST00000580357 A0A0G2JRQ6 117 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 MFSD2BA6NFX1 497 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 PPP5D1E7EU14 171 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 NDUFB6O95139 128 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 IGLV1-51P01701 117 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 SULT1A3P0DMM9 295 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 SULT1A4P0DMN0 295 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 IL7P13232 177 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 CCR6P51684 374 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 MFAP4P55083 255 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 IL34Q6ZMJ4 242 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 Q6ZRM9 215 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 OR2K2Q8NGT1 345 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 SCARB1Q8WTV0 552 aa12.53□□□□□ -0.4
IFT20-210ENST00000580357 A0A1B0GU03 582 aa12.52□□□□□ -0.41
IFT20-210ENST00000580357 LY86O95711 162 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms