RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 SAMD13Q5VXD3 122 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 TOMM20LQ6UXN7 152 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 ANKRD29Q8N6D5 301 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 Q8N976 141 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 OR11H6Q8NGC7 330 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 OR2T4Q8NH00 348 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 OR2T27Q8NH04 317 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 TYMSOSQ8TAI1 123 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 TMEM158Q8WZ71 300 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 LZICQ8WZA0 190 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 ROPN1LQ96C74 230 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 TCEAL4Q96EI5 215 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 REEP6Q96HR9 211 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 ABHD14BQ96IU4 210 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 CNBD2Q96M20 576 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 TRIB3Q96RU7 358 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 TBX5Q99593 518 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 TMEM70Q9BUB7 260 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 CHCHD7Q9BUK0 85 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 PBDC1Q9BVG4 233 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 COMMD5Q9GZQ3 224 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 SH3BGRL3Q9H299 93 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 KCNIP2Q9NS61 270 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 LYRM2Q9NU23 88 aaPredicted RBP2.16□□□□□ -2.06
KPNB1-208ENST00000580019 SS18L2Q9UHA2 77 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 ANAPC10Q9UM13 185 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 LOXHD1Q8IVV2 1947 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 ATAD5Q96QE3 1844 aa2.16□□□□□ -2.06
KPNB1-208ENST00000580019 TLN1Q9Y490 2541 aaKnown RBP2.16□□□□□ -2.06
KPNB1-208ENST00000580019 CACNA1DQ01668 2161 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 IGKV1-6A0A0C4DH72 117 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 A0A1B0GVX0 72 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 TRAPPC13A5PLN9 417 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 A6NDX4 124 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 ZNF850A8MQ14 1090 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 E7EQ34 232 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 H0YJW9 148 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 M0R381 172 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 AIPO00170 330 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 PIRO00625 290 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 ORC5O43913 435 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 CDRT1O95170 752 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 APOMO95445 188 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 CRYZL1O95825 349 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 CCNE2O96020 404 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 IGKV1-39P01597 117 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 IGLV3-27P01718 113 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 IGKV1D-39P04432 117 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 HLA-DQB2P05538 268 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 OR10J4P0C629 311 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 SPI1P17947 270 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 CNTFRP26992 372 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 ERP29P30040 261 aaKnown RBP2.15□□□□□ -2.07
KPNB1-208ENST00000580019 PHBP35232 272 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 ESRRGP62508 458 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 IGLV3-21P80748 117 aaPredicted RBP2.15□□□□□ -2.07
KPNB1-208ENST00000580019 GNA12Q03113 381 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 DAZ2Q13117 558 aaKnown RBP2.15□□□□□ -2.07
KPNB1-208ENST00000580019 MMDQ15546 238 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 TMEM241Q24JQ0 296 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 TMEM78Q5T7P6 136 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 EBLN2Q6P2I7 272 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 DCUN1D2Q6PH85 259 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 MARCH3Q86UD3 253 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 KRTAP7-1Q8IUC3 87 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 BAP18Q8IXM2 172 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 YIPF7Q8N8F6 280 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 Q8N9W7 124 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 OR10G2Q8NGC3 310 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 LINC01006Q8NI28 216 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 GRPEL2Q8TAA5 225 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 C2orf15Q8WU43 125 aaKnown RBP2.15□□□□□ -2.07
KPNB1-208ENST00000580019 RTN4IP1Q8WWV3 396 aaPredicted RBP2.15□□□□□ -2.07
KPNB1-208ENST00000580019 C11orf40Q8WZ69 217 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 GPR146Q96CH1 333 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 RMND5BQ96G75 393 aaPredicted RBP2.15□□□□□ -2.07
KPNB1-208ENST00000580019 TSC22D3Q99576 134 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 TBL1YQ9BQ87 522 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 TMEM147Q9BVK8 224 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 DAZ3Q9NR90 486 aaKnown RBP2.15□□□□□ -2.07
KPNB1-208ENST00000580019 ACER3Q9NUN7 267 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 ZNRD1Q9P1U0 126 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 OR52A1Q9UKL2 312 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 SSR3Q9UNL2 185 aa2.15□□□□□ -2.07
KPNB1-208ENST00000580019 ATMQ13315 3056 aa2.14□□□□□ -2.07
KPNB1-208ENST00000580019 SPTBN1Q01082 2364 aaKnown RBP2.14□□□□□ -2.07
KPNB1-208ENST00000580019 IGHV3-64DA0A0J9YX35 117 aa2.14□□□□□ -2.07
KPNB1-208ENST00000580019 IGSF23A1L1A6 192 aa2.14□□□□□ -2.07
KPNB1-208ENST00000580019 MAP1LC3B2A6NCE7 125 aa2.14□□□□□ -2.07
KPNB1-208ENST00000580019 C4orf51C9J302 202 aa2.14□□□□□ -2.07
KPNB1-208ENST00000580019 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.14□□□□□ -2.07
KPNB1-208ENST00000580019 H7C1C5 153 aa2.14□□□□□ -2.07
KPNB1-208ENST00000580019 SLC17A3O00476 420 aa2.14□□□□□ -2.07
KPNB1-208ENST00000580019 KPNA4O00629 521 aaPredicted RBP2.14□□□□□ -2.07
KPNB1-208ENST00000580019 ARPC5O15511 151 aa2.14□□□□□ -2.07
KPNB1-208ENST00000580019 GSTZ1O43708 216 aaPredicted RBP2.14□□□□□ -2.07
KPNB1-208ENST00000580019 TRAF3IP2O43734 574 aaPredicted RBP2.14□□□□□ -2.07
KPNB1-208ENST00000580019 NDUFC2O95298 119 aa2.14□□□□□ -2.07
KPNB1-208ENST00000580019 GPR75O95800 540 aa2.14□□□□□ -2.07
KPNB1-208ENST00000580019 LTAP01374 205 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms