RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 LINC01587Q99440 93 aa8.48□□□□□ -1.05
MSI2-209ENST00000579483 ZFHX2Q9C0A1 2572 aaPredicted RBP8.48□□□□□ -1.05
MSI2-209ENST00000579483 COL8A2P25067 703 aa8.48□□□□□ -1.05
MSI2-209ENST00000579483 OR10S1Q8NGN2 331 aa8.48□□□□□ -1.05
MSI2-209ENST00000579483 ANGPTL6Q8NI99 470 aa8.48□□□□□ -1.05
MSI2-209ENST00000579483 REG4Q9BYZ8 158 aa8.48□□□□□ -1.05
MSI2-209ENST00000579483 KIAA1671Q9BY89 1806 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 TNFSF13O75888 250 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 C1QL1O75973 258 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 SULT1A2P50226 295 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 DMRTC2Q8IXT2 367 aaPredicted RBP8.47□□□□□ -1.05
MSI2-209ENST00000579483 FAM89BQ8N5H3 189 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 KCNS1Q96KK3 526 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 SPOCK3Q9BQ16 436 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 MED19A0JLT2 244 aaPredicted RBP8.47□□□□□ -1.05
MSI2-209ENST00000579483 C15orf61A6NNL5 157 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 PAQR4Q8N4S7 273 aaPredicted RBP8.47□□□□□ -1.05
MSI2-209ENST00000579483 Q8TCH9 128 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 CD99P14209 185 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 PACRGQ96M98 296 aaPredicted RBP8.47□□□□□ -1.05
MSI2-209ENST00000579483 IGHV1-3A0A0C4DH29 117 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 PMCHP20382 165 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 DOCK8Q8NF50 2099 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 PCNX2A6NKB5 2137 aa8.47□□□□□ -1.05
MSI2-209ENST00000579483 SCO1O75880 301 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 GATA4P43694 442 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 HGFACQ04756 655 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 ZNF362Q5T0B9 420 aaPredicted RBP8.46□□□□□ -1.05
MSI2-209ENST00000579483 SIGIRRQ6IA17 410 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 AQP10Q96PS8 301 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 TP53RKQ96S44 253 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 C1QTNF4Q9BXJ3 329 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 IGKV1-9A0A0C4DH69 117 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 ASIPP42127 132 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 TCL1AP56279 114 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 KRTDAPP60985 99 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 MIEN1Q9BRT3 115 aa8.46□□□□□ -1.05
MSI2-209ENST00000579483 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.46□□□□□ -1.06
MSI2-209ENST00000579483 GCGP01275 180 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 IGKV3-20P01619 116 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 MT-ND6P03923 174 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 NBEAP1P0C6P0 100 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 BRD3OSQ6XYD6 125 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 GAFA1Q96PS6 74 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 FUT9Q9Y231 359 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 TRGV2A0A075B6R0 118 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 IGHV3-23P01764 117 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 DLX1P56177 255 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 MEF2BQ02080 365 aaPredicted RBP8.46□□□□□ -1.06
MSI2-209ENST00000579483 DEFB113Q30KQ7 82 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 SLC25A48Q6ZT89 311 aaKnown RBP8.46□□□□□ -1.06
MSI2-209ENST00000579483 TMEM144Q7Z5S9 345 aa8.46□□□□□ -1.06
MSI2-209ENST00000579483 FAM223BA6NKX1 122 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 AMY1AP04745 511 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 DUTP33316 252 aaKnown RBP8.45□□□□□ -1.06
MSI2-209ENST00000579483 LYRM7Q5U5X0 104 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 FAM223AQ8IWN6 122 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 TMEM37Q8WXS4 190 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 RAB24Q969Q5 203 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 IGHV3OR16-13A0A075B7E8 117 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 TRBV7-1A0A0A6YYK4 115 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 IGHV3-74A0A0B4J1X5 117 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 IGHV1-69DA0A0B4J2H0 117 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 ZNF207O43670 478 aaKnown RBP8.45□□□□□ -1.06
MSI2-209ENST00000579483 IGHV1-69P01742 117 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 IL6RP08887 468 aaPredicted RBP8.45□□□□□ -1.06
MSI2-209ENST00000579483 PRCDQ00LT1 54 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 C5orf64Q2M2E5 130 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 IBA57Q5T440 356 aaKnown RBP8.45□□□□□ -1.06
MSI2-209ENST00000579483 C11orf44Q8N8P7 122 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 HSPB8Q9UJY1 196 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 FAM215AQ9Y5M1 114 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 FOXI3A8MTJ6 420 aaPredicted RBP8.45□□□□□ -1.06
MSI2-209ENST00000579483 BUB1B-PAK6H3BSN5 160 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 ZNF253O75346 499 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 HLA-DRB1P01911 266 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 ZNF56Q15929 161 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 AANATQ16613 207 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 TMEM101Q96IK0 257 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 KIR2DL4Q99706 377 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 SDF2L1Q9HCN8 221 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 CBY3A6NI87 242 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 RUNX1Q01196 453 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 TMEM42Q69YG0 159 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 STPG2Q8N412 459 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 OR1P1Q8NH06 330 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 SRSF8Q9BRL6 282 aaKnown RBP8.45□□□□□ -1.06
MSI2-209ENST00000579483 TMEM191AQ9H0A3 160 aa8.45□□□□□ -1.06
MSI2-209ENST00000579483 ALPK2Q86TB3 2170 aa8.44□□□□□ -1.06
MSI2-209ENST00000579483 CSN3P07498 182 aa8.44□□□□□ -1.06
MSI2-209ENST00000579483 CXCL3P19876 107 aa8.44□□□□□ -1.06
MSI2-209ENST00000579483 MPZP25189 248 aa8.44□□□□□ -1.06
MSI2-209ENST00000579483 PRSS8Q16651 343 aa8.44□□□□□ -1.06
MSI2-209ENST00000579483 NEUROG1Q92886 237 aa8.44□□□□□ -1.06
MSI2-209ENST00000579483 NUP210Q8TEM1 1887 aaPredicted RBP8.44□□□□□ -1.06
MSI2-209ENST00000579483 IGHV2-70DA0A0C4DH43 119 aa8.44□□□□□ -1.06
MSI2-209ENST00000579483 A0A1B0GUS0 222 aa8.44□□□□□ -1.06
MSI2-209ENST00000579483 CD55P08174 381 aa8.44□□□□□ -1.06
MSI2-209ENST00000579483 OTX1P32242 354 aaPredicted RBP8.44□□□□□ -1.06
MSI2-209ENST00000579483 SAA4P35542 130 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms