RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 DGCR14Q96DF8 476 aaKnown RBP6.61□□□□□ -1.35
GGA3-207ENST00000578896 MISP3Q96FF7 219 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 S100A16Q96FQ6 103 aaKnown RBP6.61□□□□□ -1.35
GGA3-207ENST00000578896 RNF2Q99496 336 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 SPAG8Q99932 426 aaPredicted RBP6.61□□□□□ -1.35
GGA3-207ENST00000578896 SRSF8Q9BRL6 282 aaKnown RBP6.61□□□□□ -1.35
GGA3-207ENST00000578896 Q9H521 79 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 DAZ1Q9NQZ3 744 aaKnown RBP6.61□□□□□ -1.35
GGA3-207ENST00000578896 COMMD9Q9P000 198 aa6.61□□□□□ -1.35
GGA3-207ENST00000578896 GPR31O00270 319 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 NDUFA4O00483 81 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 SNAPC5O75971 98 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 YIF1AO95070 293 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 EIF4EP06730 217 aaKnown RBP6.6□□□□□ -1.35
GGA3-207ENST00000578896 CTSGP08311 255 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 HRH1P35367 487 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 APOC4P55056 127 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 IZUMO4Q1ZYL8 232 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 UBE2NLQ5JXB2 153 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 LAMTOR1Q6IAA8 161 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 WFDC3Q8IUB2 231 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 GBGT1Q8N5D6 347 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 TSPAN14Q8NG11 270 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 SLC25A46Q96AG3 418 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 RNF183Q96D59 192 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 BSCL2Q96G97 398 aaPredicted RBP6.6□□□□□ -1.35
GGA3-207ENST00000578896 ANAPC10Q9UM13 185 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 HERC2O95714 4834 aa6.6□□□□□ -1.35
GGA3-207ENST00000578896 IGHV3-66A0A0C4DH42 116 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 CHEK1O14757 476 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 IGKV1-39P01597 117 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 IGKV1D-39P04432 117 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 NAT1P18440 290 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 PRSS3P35030 304 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 BMI1P35226 326 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 RNASE12Q5GAN4 147 aaKnown RBP6.59□□□□□ -1.35
GGA3-207ENST00000578896 CEMP1Q6PRD7 247 aaPredicted RBP6.59□□□□□ -1.35
GGA3-207ENST00000578896 Q6ZWC4 215 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 TBC1D26Q86UD7 250 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 SNX29P2Q8IUI4 249 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 RPP25LQ8N5L8 163 aaKnown RBP6.59□□□□□ -1.35
GGA3-207ENST00000578896 STPG3Q8N7X2 389 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 OR6F1Q8NGZ6 308 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 PINX1Q96BK5 328 aaKnown RBP6.59□□□□□ -1.35
GGA3-207ENST00000578896 RHPN1-AS1Q9BWJ2 59 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 MAP6D1Q9H9H5 199 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 COMMD3Q9UBI1 195 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 SMPXQ9UHP9 88 aa6.59□□□□□ -1.35
GGA3-207ENST00000578896 IGHV7-4-1A0A0J9YVY3 117 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 OR4C46A6NHA9 309 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 C15orf61A6NNL5 157 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 I3L2K1 104 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 K7EMT4 169 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 DEFB4AO15263 64 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 CYB5BO43169 146 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 DEDDO75618 318 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 MT-CO2P00403 227 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 APOHP02749 345 aaPredicted RBP6.58□□□□□ -1.36
GGA3-207ENST00000578896 TAS2R46P59540 309 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 TSPAN5P62079 268 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 THOC7Q6I9Y2 204 aaKnown RBP6.58□□□□□ -1.36
GGA3-207ENST00000578896 SPSB3Q6PJ21 355 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 HSD17B13Q7Z5P4 300 aaPredicted RBP6.58□□□□□ -1.36
GGA3-207ENST00000578896 CMTM1Q8IZ96 169 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 LILRB2Q8N423 598 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 TMEM116Q8NCL8 245 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 MRGPRFQ96AM1 343 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 YIPF6Q96EC8 236 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 SEC22AQ96IW7 307 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 TMEM14BQ9NUH8 114 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 PRNDQ9UKY0 176 aa6.58□□□□□ -1.36
GGA3-207ENST00000578896 NUPR2A6NF83 97 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 C15orf62A8K5M9 175 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 M0QYG6 137 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 UBE2CO00762 179 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 NUPL2O15504 423 aaKnown RBP6.57□□□□□ -1.36
GGA3-207ENST00000578896 PI3P19957 117 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 MFAP4P55083 255 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 NANOS2P60321 138 aaKnown RBP6.57□□□□□ -1.36
GGA3-207ENST00000578896 NCS1P62166 190 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 KCTD21Q4G0X4 260 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 H2BFWTQ7Z2G1 175 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 OR1P1Q8NH06 330 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 OR4A16Q8NH70 328 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 GPX8Q8TED1 209 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 PHLDA1Q8WV24 401 aaPredicted RBP6.57□□□□□ -1.36
GGA3-207ENST00000578896 BORCS5Q969J3 196 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 GALNT14Q96FL9 552 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 TMEM56Q96MV1 263 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 TP53TG1Q9Y2A0 90 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 HECTD4Q9Y4D8 3996 aa6.57□□□□□ -1.36
GGA3-207ENST00000578896 TRAV14DV4A0A0A6YYC5 116 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 KIR2DL5BA0A0G2JN68 375 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 KIR2DL5BA0A0G2JPC4 375 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 GNG7O60262 68 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 HPGDSO60760 199 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 FGF2P09038 288 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 VBP1P61758 197 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 MLANAQ16655 118 aa6.56□□□□□ -1.36
GGA3-207ENST00000578896 FAM90A2PQ658T7 463 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms