RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 ZNF343Q6P1L6 599 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 ZNF562Q6V9R5 426 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 SPAG16Q8N0X2 631 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 CCDC71LQ8N9Z2 235 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 LFNGQ8NES3 379 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 ABHD5Q8WTS1 349 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 HARBI1Q96MB7 349 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 MS4A10Q96PG2 267 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 TP53RKQ96S44 253 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 SLC25A21Q9BQT8 299 aaPredicted RBP5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 FBXL15Q9H469 300 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 NAA60Q9H7X0 242 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 COPZ2Q9P299 210 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 PEF1Q9UBV8 284 aaKnown RBP5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 PRELID3BQ9Y3B1 194 aa5.36□□□□□ -1.55
CDK5RAP3-209ENST00000578663 MUC2Q02817 5179 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 TEX13DA0A0J9YY54 714 aaPredicted RBP5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 ANKRD34BA5PLL1 514 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 UBE2CO00762 179 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 SHOXO15266 292 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 RBFOX2O43251 390 aaKnown RBP eCLIP5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 IGKV1-39P01597 117 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 IGLV2-23P01705 113 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 IGKV1D-39P04432 117 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 TCRBP04435 133 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 OR5AC1P0C628 307 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 RRASP10301 218 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 RPA2P15927 270 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 AKR1C4P17516 323 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 ANXA7P20073 488 aaKnown RBP5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 S100GP29377 79 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 KIR2DS2P43631 304 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 LPAR6P43657 344 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 SUPT4H1P63272 117 aaKnown RBP5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 TAGLNQ01995 201 aaKnown RBP5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 CBX3Q13185 183 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 PLGLAQ15195 96 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 PSG5Q15238 335 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 MZT2BQ6NZ67 158 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 NRARPQ7Z6K4 114 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 VKORC1L1Q8N0U8 176 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 CENPSQ8N2Z9 138 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 OR4S2Q8NH73 311 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 DYNLRB2Q8TF09 96 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 SCGB3A2Q96PL1 93 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 RNF5Q99942 180 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 MFFQ9GZY8 342 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 C20orf85Q9H1P6 137 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 TECRQ9NZ01 308 aaKnown RBP5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 PRR13Q9NZ81 148 aa5.35□□□□□ -1.55
CDK5RAP3-209ENST00000578663 VPS13BQ7Z7G8 4022 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 TRAV6A0A075B6T7 132 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 C3orf85A0A1B0GTC6 90 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 FAM240BA0A1B0GVZ2 78 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 SPRY2O43597 315 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 SPDEFO95238 335 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 CRYGBP07316 175 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 SAA1P0DJI8 122 aaPredicted RBP5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 UCP1P25874 307 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 APOC4P55056 127 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 DEFA1P59665 94 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 DEFA3P59666 94 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 DHODHQ02127 395 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 PPP1R1AQ13522 171 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 TMEM187Q14656 261 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 MRGPRG-AS1Q2M3A8 158 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 DEFB114Q30KQ6 69 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 SSX9Q7RTT3 188 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 SLC25A42Q86VD7 318 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 LHFPL5Q8TAF8 219 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 OSR1Q8TAX0 266 aaPredicted RBP5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 ENKURQ8TC29 256 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 CD300LFQ8TDQ1 290 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 GLYATL2Q8WU03 294 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 USMG5Q96IX5 58 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 TMEM68Q96MH6 324 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 C18orf15Q96N68 181 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 CLCC1Q96S66 551 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 TSNAXQ99598 290 aaKnown RBP5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 FAM103A1Q9BTL3 118 aaKnown RBP5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 PLEKHA2Q9HB19 425 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 NUDT15Q9NV35 164 aa5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 METTL1Q9UBP6 276 aaKnown RBP5.34□□□□□ -1.55
CDK5RAP3-209ENST00000578663 FAT4Q6V0I7 4981 aa5.34□□□□□ -1.56
CDK5RAP3-209ENST00000578663 TRAV3A0A0B4J244 114 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 KIR2DL5BA0A0G2JN68 375 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 KIR2DL5BA0A0G2JPC4 375 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 A0A0G2JRQ6 117 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 FCN1O00602 326 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 SFT2D2O95562 160 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 HPRT1P00492 218 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 CA2P00918 260 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 SERPINE2P07093 398 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 H2AFB2P0C5Z0 115 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 MYOD1P15172 320 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 VAMP1P23763 118 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 G6PCP35575 357 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 LGALS7P47929 136 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 TAS2R31P59538 309 aa5.33□□□□□ -1.56
CDK5RAP3-209ENST00000578663 UBE2KP61086 200 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms