RNA–Protein interactions for RNA: ENST00000578516.1

CDC42EP4-203, Transcript of CDC42 effector protein 4, humanhuman

TSL 4

Gene CDC42EP4, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-203ENST00000578516 NMSQ5H8A3 153 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 ZNF343Q6P1L6 599 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 FAM223AQ8IWN6 122 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 LGI3Q8N145 548 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 NECAP1Q8NC96 275 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 OR52B4Q8NGK2 314 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 DLX4Q92988 240 aaPredicted RBP16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 CCDC140Q96MF4 163 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 SRSF8Q9BRL6 282 aaKnown RBP16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 FKBP11Q9NYL4 201 aa16.7■□□□□ 0.26
CDC42EP4-203ENST00000578516 PPP5D1E7EU14 171 aa16.69■□□□□ 0.26
CDC42EP4-203ENST00000578516 ATG12O94817 140 aa16.69■□□□□ 0.26
CDC42EP4-203ENST00000578516 IFNA17P01571 189 aa16.69■□□□□ 0.26
CDC42EP4-203ENST00000578516 PRB2P02812 416 aaPredicted RBP16.69■□□□□ 0.26
CDC42EP4-203ENST00000578516 UBE2MP61081 183 aaKnown RBP16.69■□□□□ 0.26
CDC42EP4-203ENST00000578516 ZNF429Q86V71 674 aa16.69■□□□□ 0.26
CDC42EP4-203ENST00000578516 IL22RA2Q969J5 263 aa16.69■□□□□ 0.26
CDC42EP4-203ENST00000578516 F11RQ9Y624 299 aaKnown RBP16.69■□□□□ 0.26
CDC42EP4-203ENST00000578516 A0A0G2JLM5 398 aa16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 C9orf170A2RU37 121 aa16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 HSPB1P04792 205 aaKnown RBP16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 ANXA3P12429 323 aa16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 HOXD3P31249 432 aaPredicted RBP16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 THOC7Q6I9Y2 204 aaKnown RBP16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 SLC25A24Q6NUK1 477 aa16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 OR2C3Q8N628 320 aa16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 USMG5Q96IX5 58 aa16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 PLEKHA3Q9HB20 300 aa16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 ZC4H2Q9NQZ6 224 aa16.68■□□□□ 0.26
CDC42EP4-203ENST00000578516 A0A0B4J2A0 478 aa16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 HLA-AP01891 365 aaKnown RBP16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 TCRBP04435 133 aa16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 OR4E1P0C645 316 aa16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 OR8U8P0C7N1 319 aa16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 HOXA1P49639 335 aaPredicted RBP16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 DHRS2Q13268 280 aa16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 ASAH1Q13510 395 aa16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 BEAN1Q3B7T3 259 aa16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 FAM219AQ8IW50 185 aa16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 NUDT15Q9NV35 164 aa16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 SHPKQ9UHJ6 478 aa16.67■□□□□ 0.26
CDC42EP4-203ENST00000578516 NOTCH1P46531 2555 aa16.66■□□□□ 0.26
CDC42EP4-203ENST00000578516 BMPR1BO00238 502 aa16.66■□□□□ 0.26
CDC42EP4-203ENST00000578516 HOXB5P09067 269 aa16.66■□□□□ 0.26
CDC42EP4-203ENST00000578516 KLK9Q2XQG4 91 aa16.66■□□□□ 0.26
CDC42EP4-203ENST00000578516 CLEC19AQ6UXS0 136 aa16.66■□□□□ 0.26
CDC42EP4-203ENST00000578516 PEF1Q9UBV8 284 aaKnown RBP16.66■□□□□ 0.26
CDC42EP4-203ENST00000578516 KLK9Q9UKQ9 250 aa16.66■□□□□ 0.26
CDC42EP4-203ENST00000578516 ADAP1O75689 374 aa16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 DHFRP00374 187 aa16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 IGHV3-48P01763 117 aa16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 SULT1A3P0DMM9 295 aa16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 SULT1A4P0DMN0 295 aa16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 C4orf46Q504U0 113 aa16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 LYG2Q86SG7 212 aa16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 MISP3Q96FF7 219 aa16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 SEC22CQ9BRL7 303 aa16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 PDCD10Q9BUL8 212 aa16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.65■□□□□ 0.26
CDC42EP4-203ENST00000578516 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP16.64■□□□□ 0.25
CDC42EP4-203ENST00000578516 MPTX1A8MV57 137 aa16.64■□□□□ 0.25
CDC42EP4-203ENST00000578516 HIST1H1BP16401 226 aaKnown RBP16.64■□□□□ 0.25
CDC42EP4-203ENST00000578516 SRPXP78539 464 aa16.64■□□□□ 0.25
CDC42EP4-203ENST00000578516 AARDQ4LEZ3 155 aa16.64■□□□□ 0.25
CDC42EP4-203ENST00000578516 HSD17B13Q7Z5P4 300 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP4-203ENST00000578516 HAPLN4Q86UW8 402 aa16.64■□□□□ 0.25
CDC42EP4-203ENST00000578516 RCC1LQ96I51 464 aaKnown RBP16.64■□□□□ 0.25
CDC42EP4-203ENST00000578516 RANGRFQ9HD47 186 aaPredicted RBP16.64■□□□□ 0.25
CDC42EP4-203ENST00000578516 FAM240BA0A1B0GVZ2 78 aa16.63■□□□□ 0.25
CDC42EP4-203ENST00000578516 SEC14L6B5MCN3 397 aa16.63■□□□□ 0.25
CDC42EP4-203ENST00000578516 K7EIM0 57 aa16.63■□□□□ 0.25
CDC42EP4-203ENST00000578516 OVOL1O14753 267 aa16.63■□□□□ 0.25
CDC42EP4-203ENST00000578516 RNASE2P10153 161 aaKnown RBP16.63■□□□□ 0.25
CDC42EP4-203ENST00000578516 EDN2P20800 178 aa16.63■□□□□ 0.25
CDC42EP4-203ENST00000578516 SMCO1Q147U7 214 aa16.63■□□□□ 0.25
CDC42EP4-203ENST00000578516 GGNBP1Q5YKI7 109 aa16.63■□□□□ 0.25
CDC42EP4-203ENST00000578516 LRTM2Q8N967 370 aa16.63■□□□□ 0.25
CDC42EP4-203ENST00000578516 GPR183P32249 361 aa16.62■□□□□ 0.25
CDC42EP4-203ENST00000578516 SYNJ2BPP57105 145 aa16.62■□□□□ 0.25
CDC42EP4-203ENST00000578516 SPCS3P61009 180 aa16.62■□□□□ 0.25
CDC42EP4-203ENST00000578516 DEFA6Q01524 100 aa16.62■□□□□ 0.25
CDC42EP4-203ENST00000578516 ZNF502Q8TBZ5 544 aa16.62■□□□□ 0.25
CDC42EP4-203ENST00000578516 EEF1AKMT3Q96AZ1 226 aa16.62■□□□□ 0.25
CDC42EP4-203ENST00000578516 IGHV3-35A0A0C4DH35 117 aa16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 CEBPZOSA8MTT3 80 aa16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 F8W735 103 aaPredicted RBP16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 H2AFB2P0C5Z0 115 aa16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 KRTAP10-11P60412 298 aa16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 MZT2BQ6NZ67 158 aa16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 ZNF114Q8NC26 417 aa16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 OR1P1Q8NH06 330 aa16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 OR1S1Q8NH92 325 aa16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 PINX1Q96BK5 328 aaKnown RBP16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 RBKSQ9H477 322 aa16.61■□□□□ 0.25
CDC42EP4-203ENST00000578516 CCSO14618 274 aa16.6■□□□□ 0.25
CDC42EP4-203ENST00000578516 SPNP16150 400 aa16.6■□□□□ 0.25
CDC42EP4-203ENST00000578516 ERHP84090 104 aaKnown RBP16.6■□□□□ 0.25
CDC42EP4-203ENST00000578516 RPEL1Q2QD12 228 aa16.6■□□□□ 0.25
CDC42EP4-203ENST00000578516 NRARPQ7Z6K4 114 aa16.6■□□□□ 0.25
CDC42EP4-203ENST00000578516 ENKURQ8TC29 256 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms