RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 LCN6P62502 163 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 RPL23AP62750 156 aaKnown RBP1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 RPL23P62829 140 aaKnown RBP1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 RPS24P62847 133 aaKnown RBP1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 PAFAH1B2P68402 229 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 CSNK1G2P78368 415 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 PSG9Q00887 426 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 TGM3Q08188 693 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 SMAGPQ0VAQ4 97 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 ZNF266Q14584 549 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 OR1Q1Q15612 314 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 NSDHLQ15738 373 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 MSMO1Q15800 293 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 PSG3Q16557 428 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 PLPPR5Q32ZL2 321 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 TMEM128Q5BJH2 165 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 LRRC10Q5BKY1 277 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 SPIN3Q5JUX0 258 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 BVES-AS1Q5T3Y7 98 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 PRAMEF5Q5TYX0 476 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 PRAMEF6Q5VXH4 476 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 SLC8B1Q6J4K2 584 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 FAM71F2Q6NXP2 309 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 MRPL21Q7Z2W9 205 aaKnown RBP1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 NIT1Q86X76 327 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 C20orf196Q8IYI0 205 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 C1orf174Q8IYL3 243 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 TMEM86AQ8N2M4 240 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 ZNF676Q8N7Q3 588 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 ZIC4Q8N9L1 334 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 FER1L6-AS1Q8NA97 138 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 C5orf17Q8NAS9 161 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 ZNF740Q8NDX6 193 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 OR2M3Q8NG83 312 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 OR2Z1Q8NG97 314 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 OR10W1Q8NGF6 305 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 OR51G1Q8NGK1 321 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 OR4P4Q8NGL7 312 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 OR4S2Q8NH73 311 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 C11orf40Q8WZ69 217 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 STARD4Q96DR4 205 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 RBMXL1Q96E39 390 aaKnown RBP1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 WDR34Q96EX3 536 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 ZC2HC1AQ96GY0 325 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 TMEM101Q96IK0 257 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 ZNF681Q96N22 645 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 OR5B12Q96R08 314 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 OR2V2Q96R30 315 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 OR7D2Q96RA2 312 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 IMMP2LQ96T52 175 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 NMNAT3Q96T66 252 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 AMELYQ99218 206 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 AGMATQ9BSE5 352 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 RTBDNQ9BSG5 229 aaPredicted RBP1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 EFCAB11Q9BUY7 163 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 MAP1LC3BQ9GZQ8 125 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 AICDAQ9GZX7 198 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 C11orf1Q9H5F2 150 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 PATZ1Q9HBE1 687 aaKnown RBP1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 FAM60AQ9NP50 221 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 GPR84Q9NQS5 396 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 SLC35D1Q9NTN3 355 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 TMEM38BQ9NVV0 291 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 ZNF586Q9NXT0 402 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 BET1LQ9NYM9 111 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 MRPL27Q9P0M9 148 aaKnown RBP1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 SS18L2Q9UHA2 77 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 NAT8Q9UHE5 227 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 MRPS16Q9Y3D3 137 aaKnown RBP1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 TBL2Q9Y4P3 447 aaKnown RBP1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 TRAPPC1Q9Y5R8 145 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 PXMP4Q9Y6I8 212 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 RALGAPA1Q6GYQ0 2036 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 FANCMQ8IYD8 2048 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 ABCA7Q8IZY2 2146 aa1.48□□□□□ -2.17
PTP4A1-204ENST00000578299 IGKV1D-8A0A087WSZ0 117 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 A0A0A6YYD5 115 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 TRAV1-1A0A0B4J248 108 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 MUC21A0A0G2JKD1 596 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 MUC21A0A140T8X8 626 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 A0A1B0GWA3 101 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 LOC107986453A0A1B0GWG9 222 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 DUXBA0A1W2PPF3 345 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 HELTA6NFD8 242 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 FAM24AA6NFZ4 105 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 ARL5CA6NH57 179 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 CRYM-AS1A6NIL9 109 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 OR2AG2A6NM03 316 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 CEBPZOSA8MTT3 80 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 TMEM14DPA8MWL7 114 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 G3V4G9 280 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 TRAPPC2LH3BP13 241 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 K7EP34 96 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 SDCBPO00560 298 aaPredicted RBP1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 SLC31A1O15431 190 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 SSSCA1O60232 199 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 NDUFB2O95178 105 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 GPR75O95800 540 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 TSPAN13O95857 204 aa1.47□□□□□ -2.17
PTP4A1-204ENST00000578299 HAND1O96004 215 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms