RNA–Protein interactions for RNA: ENST00000578172.1

NDEL1-204, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

Gene NDEL1, Length 3,927 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-204ENST00000578172 LBHQ53QV2 105 aaPredicted RBP11.3□□□□□ -0.6
NDEL1-204ENST00000578172 TREML4Q6UXN2 200 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 C19orf35Q6ZS72 473 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 MBNL3Q9NUK0 354 aaKnown RBP11.3□□□□□ -0.6
NDEL1-204ENST00000578172 RELNP78509 3460 aa11.3□□□□□ -0.6
NDEL1-204ENST00000578172 TRAV5A0A0B4J249 113 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 IGKV1-16P04430 117 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 NUBP1P53384 320 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 OR4A47Q6IF82 309 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 OR51B2Q9Y5P1 312 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 TMEM210A6NLX4 147 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 K7EM74 188 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 RBFOX2O43251 390 aaKnown RBP eCLIP11.29□□□□□ -0.61e-45■■■■■ 105
NDEL1-204ENST00000578172 ATP6V1FQ16864 119 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 Q6ZS49 121 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 Q8NFD4 153 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 OR9G1Q8NH87 305 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 LINC00479Q96M42 142 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 ASCL2Q99929 193 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 MRPL37Q9BZE1 423 aaKnown RBP11.29□□□□□ -0.6
NDEL1-204ENST00000578172 GP6Q9HCN6 339 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 S4R3C0 116 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 IL6RP08887 468 aaPredicted RBP11.29□□□□□ -0.6
NDEL1-204ENST00000578172 PLGLAQ15195 96 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 HLA-DRB5Q30154 266 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 OR1L6Q8NGR2 347 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 HARBI1Q96MB7 349 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 AKAP13Q12802 2813 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 PRR33A8MZF0 331 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 LYNX1G3V0Z9 82 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 MGST3O14880 152 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 LYNX1P0DP58 116 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 COX7A1P24310 79 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 LGALS4P56470 323 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 TEPPQ6URK8 271 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 OR4S2Q8NH73 311 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 MGST2Q99735 147 aa11.29□□□□□ -0.6
NDEL1-204ENST00000578172 COL12A1Q99715 3063 aa11.28□□□□□ -0.6
NDEL1-204ENST00000578172 TIMP3P35625 211 aa11.28□□□□□ -0.6
NDEL1-204ENST00000578172 RAB7AP51149 207 aa11.28□□□□□ -0.6
NDEL1-204ENST00000578172 RBMXL3Q8N7X1 1067 aaKnown RBP11.28□□□□□ -0.6
NDEL1-204ENST00000578172 OR2T6Q8NHC8 308 aa11.28□□□□□ -0.6
NDEL1-204ENST00000578172 TMEM265A0A087WTH1 108 aa11.28□□□□□ -0.6
NDEL1-204ENST00000578172 OR5B3Q8NH48 314 aa11.28□□□□□ -0.6
NDEL1-204ENST00000578172 P2RX4Q99571 388 aa11.28□□□□□ -0.6
NDEL1-204ENST00000578172 PROP1O75360 226 aa11.28□□□□□ -0.6
NDEL1-204ENST00000578172 GNG4P50150 75 aa11.28□□□□□ -0.6
NDEL1-204ENST00000578172 RANP62826 216 aaKnown RBP11.28□□□□□ -0.6
NDEL1-204ENST00000578172 YTHDF2Q9Y5A9 579 aaKnown RBP11.28□□□□□ -0.6
NDEL1-204ENST00000578172 PCSK5Q92824 1860 aa11.27□□□□□ -0.6
NDEL1-204ENST00000578172 TNFSF4P23510 183 aa11.27□□□□□ -0.6
NDEL1-204ENST00000578172 SPATA45Q537H7 98 aa11.27□□□□□ -0.6
NDEL1-204ENST00000578172 CT45A1Q5HYN5 189 aa11.27□□□□□ -0.6
NDEL1-204ENST00000578172 CT45A3Q8NHU0 189 aa11.27□□□□□ -0.6
NDEL1-204ENST00000578172 ST6GALNAC6Q969X2 333 aa11.27□□□□□ -0.6
NDEL1-204ENST00000578172 SNHG12Q9BXW3 62 aa11.27□□□□□ -0.6
NDEL1-204ENST00000578172 M0QZK8 103 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 NUPR1O60356 82 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 GGCTO75223 188 aaKnown RBP11.27□□□□□ -0.61
NDEL1-204ENST00000578172 MOSP00540 346 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 ADH4P08319 380 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 NPSP0C0P6 89 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 LINC01551Q86U37 167 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 Q8TCH9 128 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 SFRP2Q96HF1 295 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 FAM90A1Q86YD7 464 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 KLHDC1Q8N7A1 406 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 GGTLC1Q9BX51 225 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 NPVFQ9HCQ7 196 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 BET1LQ9NYM9 111 aa11.27□□□□□ -0.61
NDEL1-204ENST00000578172 F2Z2F3 143 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 SS18L1O75177 396 aaPredicted RBP11.26□□□□□ -0.61
NDEL1-204ENST00000578172 CSN3P07498 182 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 ADMP35318 185 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 RHOBP62745 196 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 UBE2L3P68036 154 aaKnown RBP11.26□□□□□ -0.61
NDEL1-204ENST00000578172 LEMD1Q68G75 181 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 C1orf229Q6ZS94 237 aaPredicted RBP11.26□□□□□ -0.61
NDEL1-204ENST00000578172 C22orf34Q6ZV56 151 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 FAM19A2Q8N3H0 131 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 A0A1B0GW64 132 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 A8MWP6 167 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 PFN1P07737 140 aaKnown RBP11.26□□□□□ -0.61
NDEL1-204ENST00000578172 GCHFRP30047 84 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 MMDQ15546 238 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 TEX38Q6PEX7 206 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 TRAT1Q6PIZ9 186 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 TMEM208Q9BTX3 173 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 SPRY4Q9C004 299 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 RNF7Q9UBF6 113 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 FAM90A26D6RGX4 464 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 PYYP10082 97 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 ZBTB34Q8NCN2 500 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 ANAPC16Q96DE5 110 aa11.26□□□□□ -0.61
NDEL1-204ENST00000578172 CACNA1AO00555 2505 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 DSCAMO60469 2012 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 HELTA6NFD8 242 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 FBLL1A6NHQ2 334 aaKnown RBP11.25□□□□□ -0.61
NDEL1-204ENST00000578172 AHRRA9YTQ3 701 aa11.25□□□□□ -0.61
NDEL1-204ENST00000578172 DIAPH2-AS1Q14236 149 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms