RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 RPP25LQ8N5L8 163 aaKnown RBP9.13□□□□□ -0.95
RNF43-203ENST00000577716 ZCCHC14Q8WYQ9 949 aaKnown RBP9.13□□□□□ -0.95
RNF43-203ENST00000577716 HIST1H2BLQ99880 126 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 ATG101Q9BSB4 218 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 WNT10AQ9GZT5 417 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 LPAR2Q9HBW0 351 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 ZFP30Q9Y2G7 519 aa9.13□□□□□ -0.95
RNF43-203ENST00000577716 LYL1P12980 280 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 KIR2DL2P43627 348 aaPredicted RBP9.12□□□□□ -0.95
RNF43-203ENST00000577716 HGFACQ04756 655 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 MST1LQ2TV78 715 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 SPANXN1Q5VSR9 72 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 SLC25A34Q6PIV7 304 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 C12orf54Q6X4T0 127 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 LINC00469Q8N7U9 141 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 MRPL37Q9BZE1 423 aaKnown RBP9.12□□□□□ -0.95
RNF43-203ENST00000577716 E9PLN8 166 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 NTN3O00634 580 aaPredicted RBP9.12□□□□□ -0.95
RNF43-203ENST00000577716 RNF224P0DH78 156 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 C9orf106Q8NAJ2 232 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 TRAV1-1A0A0B4J248 108 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 GPR6P46095 362 aaPredicted RBP9.12□□□□□ -0.95
RNF43-203ENST00000577716 COMPP49747 757 aaPredicted RBP9.12□□□□□ -0.95
RNF43-203ENST00000577716 ARF6P62330 175 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 TWIST1Q15672 202 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 TMEM144Q7Z5S9 345 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.12□□□□□ -0.95
RNF43-203ENST00000577716 SEMA5BQ9P283 1151 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 SERF1AO75920 110 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 EAF1Q96JC9 268 aaPredicted RBP9.12□□□□□ -0.95
RNF43-203ENST00000577716 C1orf147Q96MC9 270 aaPredicted RBP9.12□□□□□ -0.95
RNF43-203ENST00000577716 NDUFAF3Q9BU61 184 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 PCNTO95613 3336 aa9.12□□□□□ -0.95
RNF43-203ENST00000577716 DNAH12Q6ZR08 3092 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 PPIAL4CA0A0B4J2A2 164 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 K7ERU9 68 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 IGKV1-5P01602 117 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 PPIAL4GP0DN37 164 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 BMI1P35226 326 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 JOSD1Q15040 202 aaPredicted RBP9.11□□□□□ -0.95
RNF43-203ENST00000577716 HIST3H2BBQ8N257 126 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 MYOZ3Q8TDC0 251 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 PSPNO60542 156 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 YPEL1O60688 119 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 RPL7P18124 248 aaKnown RBP9.11□□□□□ -0.95
RNF43-203ENST00000577716 UQCRFS1P47985 274 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 SRSF7Q16629 238 aaKnown RBP eCLIP9.11□□□□□ -0.957e-7■■■■□ 22.3
RNF43-203ENST00000577716 MORN2Q502X0 79 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 FAM19A2Q8N3H0 131 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 OCC1Q8TAD7 63 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 YPEL2Q96QA6 119 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 A0A1B0GW64 132 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 FBLL1A6NHQ2 334 aaKnown RBP9.11□□□□□ -0.95
RNF43-203ENST00000577716 CEACAM1P13688 526 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 DUTP33316 252 aaKnown RBP9.11□□□□□ -0.95
RNF43-203ENST00000577716 HBBP68871 147 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 ACSF3Q4G176 576 aaPredicted RBP9.11□□□□□ -0.95
RNF43-203ENST00000577716 DNM1P46Q6ZS02 220 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 C1QL4Q86Z23 238 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 OR5R1Q8NH85 324 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 C14orf144Q96I85 54 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 TMEM242Q9NWH2 141 aa9.11□□□□□ -0.95
RNF43-203ENST00000577716 PLCE1Q9P212 2302 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 IGHV3-35A0A0C4DH35 117 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 HLA-DRB1P01911 266 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 DMRTA2Q96SC8 542 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 PEX7O00628 323 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 OR9G9P0C7N8 305 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 MFAP4P55083 255 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 TAS2R60P59551 318 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 TBR1Q16650 682 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 GUCD1Q96NT3 240 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 CLEC7AQ9BXN2 247 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 COL25A1Q9BXS0 654 aaPredicted RBP9.1□□□□□ -0.95
RNF43-203ENST00000577716 RNASE7Q9H1E1 156 aaKnown RBP9.1□□□□□ -0.95
RNF43-203ENST00000577716 RBFOX2O43251 390 aaKnown RBP eCLIP9.1□□□□□ -0.951e-7■■■■■ 34.5
RNF43-203ENST00000577716 MGPP08493 103 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 GFRA1P56159 465 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 PET117Q6UWS5 81 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 CACNG8Q8WXS5 425 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 MRPL20Q9BYC9 149 aaKnown RBP9.1□□□□□ -0.95
RNF43-203ENST00000577716 AP5S1Q9NUS5 200 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 PLXNA2O75051 1894 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 GTF3C1Q12789 2109 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 SAA2-SAA4A0A096LPE2 208 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 IL4P05112 153 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 SAA2P0DJI9 122 aaPredicted RBP9.1□□□□□ -0.95
RNF43-203ENST00000577716 FOXF2Q12947 444 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 PYY3Q5JQD4 70 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 OR10AG1Q8NH19 301 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 UBTD1Q9HAC8 227 aa9.1□□□□□ -0.95
RNF43-203ENST00000577716 TM4SF5O14894 197 aa9.09□□□□□ -0.95
RNF43-203ENST00000577716 SRSF9Q13242 221 aaKnown RBP eCLIP9.09□□□□□ -0.952e-10■□□□□ 10.8
RNF43-203ENST00000577716 TMEM78Q5T7P6 136 aa9.09□□□□□ -0.95
RNF43-203ENST00000577716 KCNS1Q96KK3 526 aa9.09□□□□□ -0.95
RNF43-203ENST00000577716 TMEM70Q9BUB7 260 aa9.09□□□□□ -0.95
RNF43-203ENST00000577716 TRAV9-1A0A075B6T8 112 aa9.09□□□□□ -0.95
RNF43-203ENST00000577716 IGHV1-69-2A0A0G2JMI3 117 aa9.09□□□□□ -0.95
RNF43-203ENST00000577716 A0A0G2JRQ6 117 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms