RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 VENTXO95231 258 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 GYPAP02724 150 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 UQCRFS1P47985 274 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 SUMO1P63165 101 aaKnown RBP11.36□□□□□ -0.59
RNF43-202ENST00000577625 CACNA1BQ00975 2339 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 Q6ZN92 141 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 ZNF788Q6ZQV5 615 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 ZNF709Q8N972 641 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 RFESDQ8TAC1 157 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 RPUSD4Q96CM3 377 aaKnown RBP11.36□□□□□ -0.59
RNF43-202ENST00000577625 RNF2Q99496 336 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 TXN2Q99757 166 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 FAM234AQ9H0X4 552 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 OR2D2Q9H210 308 aa11.36□□□□□ -0.59
RNF43-202ENST00000577625 A0A0U1RQK1 487 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 ZNF320A2RRD8 509 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 B9A039 149 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 M0QZ24 198 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 EDDM3BP56851 147 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 EIF4EBP1Q13541 118 aaPredicted RBP11.35□□□□□ -0.59
RNF43-202ENST00000577625 SPATA45Q537H7 98 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 TMEM144Q7Z5S9 345 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 FAM216AQ8WUB2 273 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 PSMG3Q9BT73 122 aaPredicted RBP11.35□□□□□ -0.59
RNF43-202ENST00000577625 PARLQ9H300 379 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 MS4A5Q9H3V2 200 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 BET1LQ9NYM9 111 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 JPT1Q9UK76 154 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 IGHV3-43A0A0B4J1X8 118 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 NDUFS8O00217 210 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 CGB3P0DN86 165 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 CGB7P0DN87 165 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 IGLC2P0DOY2 106 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 IGLC3P0DOY3 106 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 IGHV3-43DP0DP04 118 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 SLC25A6P12236 298 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 ZNF672Q499Z4 452 aaPredicted RBP11.35□□□□□ -0.59
RNF43-202ENST00000577625 ZNF585BQ52M93 769 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 OCIAD2Q56VL3 154 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 FAM216BQ8N7L0 139 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 CCL13Q99616 98 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 TMEM204Q9BSN7 226 aa11.35□□□□□ -0.59
RNF43-202ENST00000577625 PATZ1Q9HBE1 687 aaKnown RBP11.35□□□□□ -0.59
RNF43-202ENST00000577625 TMEM178BH3BS89 294 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 F2RL2O00254 374 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 HYPMO75409 117 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 IGKV1-39P01597 117 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 IGKV1D-39P04432 117 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 ID3Q02535 119 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 CXorf66Q5JRM2 361 aaPredicted RBP11.34□□□□□ -0.59
RNF43-202ENST00000577625 FAM78BQ5VT40 261 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 UNQ5815/PRO19632Q6UWF5 114 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 SCGB1C1Q8TD33 95 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 LSM10Q969L4 123 aaKnown RBP11.34□□□□□ -0.59
RNF43-202ENST00000577625 C5orf30Q96GV9 206 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 LRBAP50851 2863 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 TMEM50AO95807 157 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 CD99P14209 185 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 ZNF16P17020 682 aaPredicted RBP11.34□□□□□ -0.59
RNF43-202ENST00000577625 GNLYP22749 145 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 ADMP35318 185 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 SERF2P84101 59 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 CST9LQ9H4G1 147 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 VSIRQ9H7M9 311 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 RAB9BQ9NP90 201 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 MRPS16Q9Y3D3 137 aaKnown RBP11.34□□□□□ -0.59
RNF43-202ENST00000577625 ZFYVE26Q68DK2 2539 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 DOCK11Q5JSL3 2073 aa11.34□□□□□ -0.59
RNF43-202ENST00000577625 TRAV38-1A0A0B4J264 116 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 A0A0G2JRQ6 117 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 LOXL3P58215 753 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 YPEL3P61236 119 aaPredicted RBP11.33□□□□□ -0.6
RNF43-202ENST00000577625 FOXL1Q12952 345 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 CATR1Q13166 79 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 MUC15Q8N387 334 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 PINX1Q96BK5 328 aaKnown RBP11.33□□□□□ -0.6
RNF43-202ENST00000577625 GPR146Q96CH1 333 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 SMIM12Q96EX1 92 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 RSG1Q9BU20 258 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 CALYQ9NYX4 217 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 GNG12Q9UBI6 72 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 TP53TG3Q9ULZ0 132 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 ZG16O60844 167 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 PSMB3P49720 205 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 LINC00310P59036 64 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 TCF23Q7RTU1 214 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 FGFRL1Q8N441 504 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 ZNF808Q8N4W9 903 aaPredicted RBP11.33□□□□□ -0.6
RNF43-202ENST00000577625 KLHDC1Q8N7A1 406 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 TCTEX1D1Q8N7M0 179 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 CCL17Q92583 94 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 PSG11Q9UQ72 335 aa11.33□□□□□ -0.6
RNF43-202ENST00000577625 PPIAL4EA0A075B759 164 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 GRIFINA4D1Z8 144 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 DIRC3C9JPN6 131 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 PPIAL4DF5H284 164 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 CHST1O43916 411 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 SERF1AO75920 110 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 IGKV1-5P01602 117 aa11.32□□□□□ -0.6
RNF43-202ENST00000577625 PPIAL4FP0DN26 164 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms