RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 COQ2Q96H96 371 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 MRPS17Q9Y2R5 130 aaKnown RBP12.01□□□□□ -0.49
SCARF1-209ENST00000576012 TRAV5A0A0B4J249 113 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 OR2T8A6NH00 312 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 NUDT3O95989 172 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 PLAUP00749 431 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 OPRK1P41145 380 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 RHOBP62745 196 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 PLGLB1Q02325 96 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 ODF1Q14990 250 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 TRIP6Q15654 476 aaKnown RBP12.01□□□□□ -0.49
SCARF1-209ENST00000576012 OR2D3Q8NGH3 330 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 OR2T6Q8NHC8 308 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 SLC25A40Q8TBP6 338 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 Q8TCH9 128 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 ORAOV1Q8WV07 137 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 GNB1LQ9BYB4 327 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 HCFC1P51610 2035 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 TMEM238C9JI98 176 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 LYZL6O75951 148 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 CLDN18P56856 261 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 SELENOVP59797 346 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 OR4A47Q6IF82 309 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 LINC00173Q6ZV60 143 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 SPATA12Q7Z6I5 190 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 WFDC12Q8WWY7 111 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 NEUROG1Q92886 237 aa12.01□□□□□ -0.49
SCARF1-209ENST00000576012 NAA38Q9BRA0 125 aaKnown RBP12.01□□□□□ -0.49
SCARF1-209ENST00000576012 MBNL3Q9NUK0 354 aaKnown RBP12.01□□□□□ -0.49
SCARF1-209ENST00000576012 RIF1Q5UIP0 2472 aaKnown RBP12.01□□□□□ -0.49
SCARF1-209ENST00000576012 P0C879 139 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 CX3CL1P78423 397 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 TAAR6Q96RI8 345 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 GAL3ST2Q9H3Q3 398 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 SH2D2AQ9NP31 389 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 POLDIP2Q9Y2S7 368 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 CACNA1HO95180 2353 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 LY6G6EA0A0G2JKS1 128 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 PROP1O75360 226 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 TNFSF4P23510 183 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 ERVK-16P61578 105 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 LINC00596Q86U02 117 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 GUCD1Q96NT3 240 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 U3KQA8 63 aa12□□□□□ -0.49
SCARF1-209ENST00000576012 GFRA3O60609 400 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 AGFG2O95081 481 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 ZNF137PP52743 207 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 OR1C1Q15619 314 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 TEPPQ6URK8 271 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 DEFB127Q9H1M4 99 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 IGHV3OR15-7A0A075B7D8 119 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 LOC102723996A0A087X1L8 192 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 IGHV2OR16-5A0A0B4J2B6 119 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 NPIPB11E5RHQ5 1161 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 ESDP10768 282 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 ARR3P36575 388 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 MPV17P39210 176 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 ZNF138P52744 262 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 VWC2Q2TAL6 325 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 DCAF12Q5T6F0 453 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 C18orf32Q8TCD1 76 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 C1orf159Q96HA4 380 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 NPVFQ9HCQ7 196 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 TCF19Q9Y242 345 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 SMG1Q96Q15 3661 aaKnown RBP11.99□□□□□ -0.49
SCARF1-209ENST00000576012 CORTO00230 105 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 DNPH1O43598 174 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 ARG2P78540 354 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 AMMECR1LQ6DCA0 310 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 SMIM15Q7Z3B0 74 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 TMEM140Q9NV12 185 aa11.99□□□□□ -0.49
SCARF1-209ENST00000576012 MED13Q9UHV7 2174 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 OOEPA6NGQ2 149 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 MT-CO2P00403 227 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 RIPPLY3P57055 190 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 NUDT10Q8NFP7 164 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 OR52E5Q8NH55 327 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 PKIBQ9C010 78 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 GGTLC3B5MD39 225 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 C22orf46C9J442 243 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 H3BTX0 84 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 AMY1AP04745 511 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 EPHA8P29322 1005 aaPredicted RBP11.98□□□□□ -0.49
SCARF1-209ENST00000576012 CSN3P07498 182 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 RAB1CQ92928 201 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 ENY2Q9NPA8 101 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 SIT1Q9Y3P8 196 aa11.98□□□□□ -0.49
SCARF1-209ENST00000576012 MUC21A0A0G2JKD1 596 aa11.97□□□□□ -0.49
SCARF1-209ENST00000576012 MUC21A0A140T8X8 626 aa11.97□□□□□ -0.49
SCARF1-209ENST00000576012 FAM181BA6NEQ2 426 aa11.97□□□□□ -0.49
SCARF1-209ENST00000576012 TOX4O94842 621 aa11.97□□□□□ -0.49
SCARF1-209ENST00000576012 NPY1RP25929 384 aa11.97□□□□□ -0.49
SCARF1-209ENST00000576012 MUC21Q5SSG8 566 aa11.97□□□□□ -0.49
SCARF1-209ENST00000576012 MRPL52Q86TS9 123 aaKnown RBP11.97□□□□□ -0.49
SCARF1-209ENST00000576012 NABP2Q9BQ15 211 aa11.97□□□□□ -0.49
SCARF1-209ENST00000576012 PTPRZ1P23471 2315 aaPredicted RBP11.97□□□□□ -0.49
SCARF1-209ENST00000576012 PLXNB1O43157 2135 aa11.97□□□□□ -0.49
SCARF1-209ENST00000576012 RAB31Q13636 194 aa11.97□□□□□ -0.49
SCARF1-209ENST00000576012 MORN5Q5VZ52 161 aa11.97□□□□□ -0.49
SCARF1-209ENST00000576012 IL19Q9UHD0 177 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms