RNA–Protein interactions for RNA: ENST00000574855.1

NUP88-209, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 434 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-209ENST00000574855 POLR2HP52434 150 aaKnown RBP2.45□□□□□ -2.02
NUP88-209ENST00000574855 ZNF140P52738 457 aaPredicted RBP2.45□□□□□ -2.02
NUP88-209ENST00000574855 MP68P56378 58 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 TAS2R19P59542 299 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 HIST1H1AQ02539 215 aaPredicted RBP2.45□□□□□ -2.02
NUP88-209ENST00000574855 HTR4Q13639 388 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 RHEBQ15382 184 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 TGIF1Q15583 401 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 ABCA11PQ4W5N1 156 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 Q6ZSR6 202 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 TCF23Q7RTU1 214 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 SGPP2Q8IWX5 399 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 TMEM252Q8N6L7 170 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 PACRGLQ8N7B6 248 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 ZNF433Q8N7K0 673 aaPredicted RBP2.45□□□□□ -2.02
NUP88-209ENST00000574855 CSNK1G2-AS1Q8NCQ2 148 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 OR5A1Q8NGJ0 315 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 OR4C6Q8NH72 309 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 TWIST2Q8WVJ9 160 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 DCUN1D4Q92564 292 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 MALSU1Q96EH3 234 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 NARS2Q96I59 477 aaKnown RBP2.45□□□□□ -2.02
NUP88-209ENST00000574855 OR5M11Q96RB7 305 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 TMEM243Q9BU79 118 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 TMEM70Q9BUB7 260 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 MRPL20Q9BYC9 149 aaKnown RBP2.45□□□□□ -2.02
NUP88-209ENST00000574855 SAMD10Q9BYL1 202 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 ZBP1Q9H171 429 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 ZNF702PQ9H963 129 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 GPR84Q9NQS5 396 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 MARCH5Q9NX47 278 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 ERG28Q9UKR5 140 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 NEUROG3Q9Y4Z2 214 aa2.45□□□□□ -2.02
NUP88-209ENST00000574855 PCYT1BQ9Y5K3 369 aaPredicted RBP2.45□□□□□ -2.02
NUP88-209ENST00000574855 PLXND1Q9Y4D7 1925 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 THSD7BQ9C0I4 1608 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 A0A087WXM4 84 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 TMED7-TICAM2A0A0A6YYA0 188 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 A0A0D9SEW6 157 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 A0A1W2PNU3 283 aaPredicted RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 TCRBV3S1A0A5B6 114 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 DHRS12A0PJE2 317 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 OR51F1A6NGY5 319 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 F6UZH7 168 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 TMEM250H0YL14 139 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 H3BSA7 217 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 AIPO00170 330 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 PHOX2AO14813 284 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 ANGPTL7O43827 346 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 ZNF354AO60765 605 aaPredicted RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 SLC25A14O95258 325 aaPredicted RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 WISP3O95389 354 aaPredicted RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 FABP3P05413 133 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 C8GP07360 202 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 KRTAP1-4P0C5Y4 121 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 LINC00032P0C843 101 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 PIRTP0C851 137 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 OR12D1P0DN82 309 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 MUC1P15941 1255 aaPredicted RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 ZNF30P17039 623 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 HMGA1P17096 107 aaKnown RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 G6PCP35575 357 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 ATP5G3P48201 142 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 AKR1D1P51857 326 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 POLR2JP52435 117 aaKnown RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 KRTAP12-2P59991 146 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 UBE2NP61088 152 aaKnown RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 RAP1AP62834 184 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 GRB2P62993 217 aaKnown RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 IFITM3Q01628 133 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 EGFEM1PQ0D2K5 195 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 OR8G1Q15617 311 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 PRR4Q16378 134 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 TAF9Q16594 264 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 GUCA2BQ16661 112 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 MORN2Q502X0 79 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 C9orf66Q5T8R8 295 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 NXNL2Q5VZ03 156 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 GLYATQ6IB77 296 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 ARL9Q6T311 187 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 RNF165Q6ZSG1 346 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 SHISA6Q6ZSJ9 500 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 DEFB128Q7Z7B8 93 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 C12orf45Q8N5I9 185 aaPredicted RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 YIPF7Q8N8F6 280 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 OR13C8Q8NGS7 320 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 OR2T27Q8NH04 317 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 OR52P1PQ8NH57 321 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 VN1R17PQ8TDU5 208 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 ZNF414Q96IQ9 312 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 C1orf147Q96MC9 270 aaPredicted RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 OR2M2Q96R28 347 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 ZNF649Q9BS31 505 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 NDFIP1Q9BT67 221 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 LINC00470Q9BZP3 86 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 DPY30Q9C005 99 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 ZNF436Q9C0F3 470 aaPredicted RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 EIF5A2Q9GZV4 153 aaKnown RBP2.44□□□□□ -2.02
NUP88-209ENST00000574855 PBOV1Q9GZY1 135 aa2.44□□□□□ -2.02
NUP88-209ENST00000574855 LPAR5Q9H1C0 372 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms