RNA–Protein interactions for RNA: ENST00000574799.5

CCDC40-212, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best)

Gene CCDC40, Length 3,795 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-212ENST00000574799 TMEM42Q69YG0 159 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 MUC15Q8N387 334 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 TMEM45BQ96B21 275 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 SFXN3Q9BWM7 321 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 MS4A5Q9H3V2 200 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 WDR83OSQ9Y284 106 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 ZZEF1O43149 2961 aa7.98□□□□□ -1.13
CCDC40-212ENST00000574799 H3BUT2 72 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 PSG7Q13046 419 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 EDDM3AQ14507 147 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 IGFBP7Q16270 282 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 MORN2Q502X0 79 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 SPATA31B1PQ5VZV4 182 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 TMEM136Q6ZRR5 245 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 MAP1LC3CQ9BXW4 147 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 SRXN1Q9BYN0 137 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 TRAV24A0A0B4J272 114 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 CHEK1O14757 476 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 NEURL1O76050 574 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 STAG3L2P0CL84 134 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 STAG3L3P0CL85 134 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 LIFP15018 202 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 SSTR5P35346 364 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 SMAGPQ0VAQ4 97 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 ASPHD1Q5U4P2 390 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 GGNQ86UU5 652 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 STRADBQ9C0K7 418 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 SH2D7A6NKC9 451 aaPredicted RBP7.97□□□□□ -1.13
CCDC40-212ENST00000574799 MPDU1O75352 247 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 P04436 131 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 FAM162BQ5T6X4 162 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 SCCPDHQ8NBX0 429 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 OR1N2Q8NGR9 330 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 C18orf32Q8TCD1 76 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 ARRDC1-AS1Q9H2J1 176 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 SH3BGRL2Q9UJC5 107 aa7.97□□□□□ -1.13
CCDC40-212ENST00000574799 PRSS47A8MTI9 375 aa7.96□□□□□ -1.13
CCDC40-212ENST00000574799 HIST1H1EP10412 219 aaKnown RBP7.96□□□□□ -1.13
CCDC40-212ENST00000574799 DSCR4P56555 118 aaPredicted RBP7.96□□□□□ -1.13
CCDC40-212ENST00000574799 TEPPQ6URK8 271 aa7.96□□□□□ -1.13
CCDC40-212ENST00000574799 Q6ZS49 121 aa7.96□□□□□ -1.13
CCDC40-212ENST00000574799 OR1B1Q8NGR6 318 aa7.96□□□□□ -1.13
CCDC40-212ENST00000574799 TMEM186Q96B77 213 aa7.96□□□□□ -1.13
CCDC40-212ENST00000574799 DAZAP1Q96EP5 407 aaKnown RBP7.96□□□□□ -1.13
CCDC40-212ENST00000574799 OR2V2Q96R30 315 aa7.96□□□□□ -1.13
CCDC40-212ENST00000574799 TMEM167BQ9NRX6 74 aa7.96□□□□□ -1.13
CCDC40-212ENST00000574799 TAX1BP3O14907 124 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 FOXH1O75593 365 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 GPR12P47775 334 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 LINC00205P59089 165 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 TAS2R45P59539 299 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 FOXL2NBQ6ZUU3 175 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 VKORC1L1Q8N0U8 176 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 STPG3Q8N7X2 389 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 FER1L6-AS1Q8NA97 138 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 NPVFQ9HCQ7 196 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 HILPDAQ9Y5L2 63 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 V9GYV3 84 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 ZNF318Q5VUA4 2279 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 ZFHX3Q15911 3703 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 M0R296 226 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 OR2H2O95918 312 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 GPR183P32249 361 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 OPRK1P41145 380 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 RPL30P62888 115 aaKnown RBP7.96□□□□□ -1.14
CCDC40-212ENST00000574799 SLAQ13239 276 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 BVES-AS1Q5T3Y7 98 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 CXorf67Q86X51 503 aaPredicted RBP7.96□□□□□ -1.14
CCDC40-212ENST00000574799 TPRX1Q8N7U7 411 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 SGK494Q96LW2 274 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 ST20Q9HBF5 79 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 DUSP13Q9UII6 198 aa7.96□□□□□ -1.14
CCDC40-212ENST00000574799 CHTOPQ9Y3Y2 248 aaKnown RBP7.96□□□□□ -1.14
CCDC40-212ENST00000574799 A6NDN8 102 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 ISLRO14498 428 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 ZNF883P0CG24 379 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 CEBPDP49716 269 aaPredicted RBP7.95□□□□□ -1.14
CCDC40-212ENST00000574799 RAC3P60763 192 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 PAX2Q02962 417 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 EBLN2Q6P2I7 272 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 ZNF645Q8N7E2 425 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 OR4S2Q8NH73 311 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 GTSF1LQ9H1H1 148 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 ADGRG4Q8IZF6 3080 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 CDIPTO14735 213 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 SSR4P51571 173 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 NHLH1Q02575 133 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 MIR17HGQ75NE6 70 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 Q8N976 141 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 CT55Q8WUE5 264 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 OSTCQ9NRP0 149 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 VPS13CQ709C8 3753 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 TRAV8-6A0A0B4J262 113 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 TMEM30CPA0ZSE6 113 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 GATA2P23769 480 aaPredicted RBP7.95□□□□□ -1.14
CCDC40-212ENST00000574799 GDF1P27539 372 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 UBE2L3P68036 154 aaKnown RBP7.95□□□□□ -1.14
CCDC40-212ENST00000574799 MRPL49Q13405 166 aaKnown RBP7.95□□□□□ -1.14
CCDC40-212ENST00000574799 TREML4Q6UXN2 200 aa7.95□□□□□ -1.14
CCDC40-212ENST00000574799 RAB1CQ92928 201 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms