RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 OR7C2O60412 319 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 KLF7O75840 302 aaPredicted RBP11.88□□□□□ -0.51
SMG6-215ENST00000574501 OR1C1Q15619 314 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 Q8IYB0 196 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 OR2Y1Q8NGV0 311 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 ZNF355PQ9NSJ1 428 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 SELENOKQ9Y6D0 94 aa11.88□□□□□ -0.51
SMG6-215ENST00000574501 GAGE12BA1L429 117 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 CAMPP49913 170 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 RIPPLY3P57055 190 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 ZNF826PQ6ZT77 177 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 LINC00173Q6ZV60 143 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 OR52E5Q8NH55 327 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 NUDT11Q96G61 164 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 COQ2Q96H96 371 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 SPOCK3Q9BQ16 436 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 DCTN5Q9BTE1 182 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 PLEKHA3Q9HB20 300 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 PROP1O75360 226 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 ARR3P36575 388 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 ZNF841Q6ZN19 808 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 ZNF503Q96F45 646 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 TMEM70Q9BUB7 260 aa11.87□□□□□ -0.51
SMG6-215ENST00000574501 TMEM238C9JI98 176 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 CD24P25063 80 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 LTBRP36941 435 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 PSG9Q00887 426 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 DEFB125Q8N687 156 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 WDR31Q8NA23 367 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 OR13A1Q8NGR1 328 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 IGF2BP2-AS1Q96M15 143 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 MCRIP2Q9BUT9 160 aaKnown RBP11.86□□□□□ -0.51
SMG6-215ENST00000574501 LINC00470Q9BZP3 86 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 WDR54Q9H977 334 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 DUTP33316 252 aaKnown RBP11.86□□□□□ -0.51
SMG6-215ENST00000574501 PPOXP50336 477 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 MOB3BQ86TA1 216 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 NUP35Q8NFH5 326 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 MEGF9Q9H1U4 602 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 SAP30LQ9HAJ7 183 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 METRNQ9UJH8 293 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 TCF19Q9Y242 345 aa11.86□□□□□ -0.51
SMG6-215ENST00000574501 TRAV8-6A0A0B4J262 113 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 M0R1X1 148 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 SAP30O75446 220 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 TOX4O94842 621 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 CELA3AP09093 270 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 GPR12P47775 334 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 RAB31Q13636 194 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 URB1-AS1Q96HZ7 61 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 NABP2Q9BQ15 211 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 TMEM167BQ9NRX6 74 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 PRRC2CQ9Y520 2896 aaKnown RBP11.85□□□□□ -0.51
SMG6-215ENST00000574501 PRR20EP86478 221 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 PRR20CP86479 221 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 PRR20DP86480 221 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 PRR20BP86481 221 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 PRR20AP86496 221 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 RPL39P5Q59GN2 51 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 SLC35E4Q6ICL7 350 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 HINT2Q9BX68 163 aa11.85□□□□□ -0.51
SMG6-215ENST00000574501 IGKV3D-15A0A087WSY6 115 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 A0A087X0K7 114 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 H0Y8G0 127 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 K7ERU9 68 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 SP1P08047 785 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 MYOD1P15172 320 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 TMEM11P17152 192 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 RPS20P60866 119 aaKnown RBP11.84□□□□□ -0.51
SMG6-215ENST00000574501 SLC25A34Q6PIV7 304 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 DEFB123Q8N688 67 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 SARAFQ96BY9 339 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 TMEM140Q9NV12 185 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 PTPRBP23467 1997 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 CORTO00230 105 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 FOXA3P55318 350 aaPredicted RBP11.84□□□□□ -0.51
SMG6-215ENST00000574501 ERVK-16P61578 105 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 KLF5Q13887 457 aaPredicted RBP11.84□□□□□ -0.51
SMG6-215ENST00000574501 TRAT1Q6PIZ9 186 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 TRIB1Q96RU8 372 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 C12orf49Q9H741 205 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 ST20Q9HBF5 79 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 RPH3ALQ9UNE2 315 aa11.84□□□□□ -0.51
SMG6-215ENST00000574501 FAM120AOSQ5T036 256 aa11.83□□□□□ -0.52
SMG6-215ENST00000574501 MDP1Q86V88 176 aa11.83□□□□□ -0.52
SMG6-215ENST00000574501 SNRNP40Q96DI7 357 aaKnown RBP11.83□□□□□ -0.52
SMG6-215ENST00000574501 DNAJC13O75165 2243 aa11.83□□□□□ -0.52
SMG6-215ENST00000574501 Q0VFX4 171 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 EDDM3AQ14507 147 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 ZNF766Q5HY98 468 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 SPINK14Q6IE38 97 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 CLEC2AQ6UVW9 174 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 WIPF2Q8TF74 440 aaPredicted RBP11.82□□□□□ -0.52
SMG6-215ENST00000574501 SLC25A10Q9UBX3 287 aaPredicted RBP11.82□□□□□ -0.52
SMG6-215ENST00000574501 LY6G6EA0A0G2JKS1 128 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 C21orf140B9A014 251 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 SYS1-DBNDD2H3BUS1 97 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 FOXE3Q13461 319 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 C3AR1Q16581 482 aa11.82□□□□□ -0.52
SMG6-215ENST00000574501 WFDC8Q8IUA0 241 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 126.2 ms