RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 WSB1Q9Y6I7 421 aa19.02■□□□□ 0.64
ATPAF1-213ENST00000574428 RPL23AP62750 156 aaKnown RBP19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 BLCAPP62952 87 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 WT1-ASQ06250 92 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 C9orf152Q5JTZ5 239 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 SPANXN5Q5MJ07 72 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 CIB3Q96Q77 187 aaPredicted RBP19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 ESM1Q9NQ30 184 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 FBXO7Q9Y3I1 522 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 IGLC7A0M8Q6 106 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 FAM24AA6NFZ4 105 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 GPR137BO60478 399 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 REG1AP05451 166 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 P2RY1P47900 373 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 TMEM86BQ8N661 226 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 PARP11Q9NR21 331 aa19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 LYRM2Q9NU23 88 aaPredicted RBP19.01■□□□□ 0.63
ATPAF1-213ENST00000574428 A0A1W2PN81 502 aa19■□□□□ 0.63
ATPAF1-213ENST00000574428 LINC01548A6NM66 108 aa19■□□□□ 0.63
ATPAF1-213ENST00000574428 AREGP15514 252 aa19■□□□□ 0.63
ATPAF1-213ENST00000574428 CHRNA7P36544 502 aa19■□□□□ 0.63
ATPAF1-213ENST00000574428 TAS2R30P59541 319 aa19■□□□□ 0.63
ATPAF1-213ENST00000574428 OR2C3Q8N628 320 aa19■□□□□ 0.63
ATPAF1-213ENST00000574428 OR4C12Q96R67 309 aa19■□□□□ 0.63
ATPAF1-213ENST00000574428 OR13C7P0DN81 318 aa18.99■□□□□ 0.63
ATPAF1-213ENST00000574428 RPL12P30050 165 aaKnown RBP18.99■□□□□ 0.63
ATPAF1-213ENST00000574428 Q6ZS46 218 aa18.99■□□□□ 0.63
ATPAF1-213ENST00000574428 CYTL1Q9NRR1 136 aa18.99■□□□□ 0.63
ATPAF1-213ENST00000574428 IGSF23A1L1A6 192 aa18.98■□□□□ 0.63
ATPAF1-213ENST00000574428 RAB14P61106 215 aa18.98■□□□□ 0.63
ATPAF1-213ENST00000574428 TMEM267Q0VDI3 215 aaPredicted RBP18.98■□□□□ 0.63
ATPAF1-213ENST00000574428 LINC00862A6NCI5 91 aa18.98■□□□□ 0.63
ATPAF1-213ENST00000574428 ATP6V0E1O15342 81 aa18.98■□□□□ 0.63
ATPAF1-213ENST00000574428 IFNA10P01566 189 aa18.98■□□□□ 0.63
ATPAF1-213ENST00000574428 EGR2P11161 476 aaPredicted RBP18.98■□□□□ 0.63
ATPAF1-213ENST00000574428 STOML3Q8TAV4 291 aa18.98■□□□□ 0.63
ATPAF1-213ENST00000574428 ERHP84090 104 aaKnown RBP18.97■□□□□ 0.63
ATPAF1-213ENST00000574428 C19orf35Q6ZS72 473 aa18.97■□□□□ 0.63
ATPAF1-213ENST00000574428 TMEM252Q8N6L7 170 aa18.97■□□□□ 0.63
ATPAF1-213ENST00000574428 SLC24A4Q8NFF2 622 aa18.97■□□□□ 0.63
ATPAF1-213ENST00000574428 ZNF418Q8TF45 676 aaPredicted RBP18.97■□□□□ 0.63
ATPAF1-213ENST00000574428 ZC4H2Q9NQZ6 224 aa18.97■□□□□ 0.63
ATPAF1-213ENST00000574428 STRAPQ9Y3F4 350 aaKnown RBP18.97■□□□□ 0.63
ATPAF1-213ENST00000574428 INS-IGF2F8WCM5 200 aa18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 METTL15P1P0C7V9 234 aa18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 S100A1P23297 94 aa18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 TMEM170AQ8WVE7 144 aa18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 FN1P02751 2386 aaKnown RBP18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 C15orf62A8K5M9 175 aa18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 CST7O76096 145 aa18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 LY86O95711 162 aa18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 SNCAP37840 140 aa18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 EWSR1Q01844 656 aaKnown RBP eCLIP18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 ASPHD1Q5U4P2 390 aa18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 MRPL41Q8IXM3 137 aaKnown RBP18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 LFNGQ8NES3 379 aa18.96■□□□□ 0.63
ATPAF1-213ENST00000574428 CRLF1O75462 422 aa18.95■□□□□ 0.62
ATPAF1-213ENST00000574428 FAM157CP0CG43 387 aa18.95■□□□□ 0.62
ATPAF1-213ENST00000574428 NPY1RP25929 384 aa18.95■□□□□ 0.62
ATPAF1-213ENST00000574428 TMEM14EPQ6UXP3 125 aa18.95■□□□□ 0.62
ATPAF1-213ENST00000574428 SLC35E3Q7Z769 313 aa18.95■□□□□ 0.62
ATPAF1-213ENST00000574428 PHYHIPLQ96FC7 376 aa18.95■□□□□ 0.62
ATPAF1-213ENST00000574428 BSCL2Q96G97 398 aaPredicted RBP18.95■□□□□ 0.62
ATPAF1-213ENST00000574428 SRSF8Q9BRL6 282 aaKnown RBP18.95■□□□□ 0.62
ATPAF1-213ENST00000574428 SLC25A31Q9H0C2 315 aa18.95■□□□□ 0.62
ATPAF1-213ENST00000574428 MAST4O15021 2626 aa18.95■□□□□ 0.62
ATPAF1-213ENST00000574428 IGHG2P01859 326 aa18.94■□□□□ 0.62
ATPAF1-213ENST00000574428 NMBP08949 121 aa18.94■□□□□ 0.62
ATPAF1-213ENST00000574428 RNASE2P10153 161 aaKnown RBP18.94■□□□□ 0.62
ATPAF1-213ENST00000574428 NHLH2Q02577 135 aa18.94■□□□□ 0.62
ATPAF1-213ENST00000574428 ECSCRQ19T08 205 aa18.94■□□□□ 0.62
ATPAF1-213ENST00000574428 BSXQ3C1V8 233 aa18.94■□□□□ 0.62
ATPAF1-213ENST00000574428 SGMS2Q8NHU3 365 aa18.94■□□□□ 0.62
ATPAF1-213ENST00000574428 CUBNO60494 3623 aa18.94■□□□□ 0.62
ATPAF1-213ENST00000574428 TPT1P13693 172 aaKnown RBP18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 RPP30P78346 268 aaKnown RBP18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 HSD17B13Q7Z5P4 300 aaPredicted RBP18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 TMEM217Q8N7C4 229 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 P2RX4Q99571 388 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 NPFFR1Q9GZQ6 430 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 LINC00527Q9UJ94 153 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 CLDN34H7C241 214 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 TAAR5O14804 337 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 HILS1P60008 231 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 FAM74A1Q5RGS3 127 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 OR8G2PQ6IF36 304 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 STX12Q86Y82 276 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 FBXL17Q9UF56 701 aa18.93■□□□□ 0.62
ATPAF1-213ENST00000574428 FAM181BA6NEQ2 426 aa18.92■□□□□ 0.62
ATPAF1-213ENST00000574428 G3V318 75 aa18.92■□□□□ 0.62
ATPAF1-213ENST00000574428 TRIM77I1YAP6 450 aa18.92■□□□□ 0.62
ATPAF1-213ENST00000574428 OR8U8P0C7N1 319 aa18.92■□□□□ 0.62
ATPAF1-213ENST00000574428 SULT1A1P50225 295 aa18.92■□□□□ 0.62
ATPAF1-213ENST00000574428 ARL16Q0P5N6 197 aa18.92■□□□□ 0.62
ATPAF1-213ENST00000574428 TMEM95Q3KNT9 176 aa18.92■□□□□ 0.62
ATPAF1-213ENST00000574428 HAPLN4Q86UW8 402 aa18.92■□□□□ 0.62
ATPAF1-213ENST00000574428 BAP18Q8IXM2 172 aa18.92■□□□□ 0.62
ATPAF1-213ENST00000574428 UNQ5815/PRO19632Q6UWF5 114 aa18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 CITED4Q96RK1 184 aa18.91■□□□□ 0.62
ATPAF1-213ENST00000574428 SMIM3Q9BZL3 60 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms