RNA–Protein interactions for RNA: ENST00000573852.5

SCARF1-206, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 2,698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-206ENST00000573852 SARAFQ96BY9 339 aa15.6■□□□□ 0.09
SCARF1-206ENST00000573852 OR5AU1Q8NGC0 362 aa15.6■□□□□ 0.09
SCARF1-206ENST00000573852 J3QR06 171 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 GNG10P50151 68 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 VHLLQ6RSH7 139 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 ZNF439Q8NDP4 499 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 CORO2AQ92828 525 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 GNB1LQ9BYB4 327 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 IL19Q9UHD0 177 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 RNF114Q9Y508 228 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 TANC2Q9HCD6 1990 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 FXYD3Q14802 87 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 MLANAQ16655 118 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 VN1R17PQ8TDU5 208 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 C20orf144Q9BQM9 153 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 SFXN3Q9BWM7 321 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 GNB4Q9HAV0 340 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 TMEM167BQ9NRX6 74 aa15.59■□□□□ 0.09
SCARF1-206ENST00000573852 SRRM4A7MD48 611 aaKnown RBP15.58■□□□□ 0.08
SCARF1-206ENST00000573852 FNDC10F2Z333 226 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 POU2AF1Q16633 256 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 C21orf62-AS1Q17RA5 79 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 SAMD10Q9BYL1 202 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 PLEKHA3Q9HB20 300 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 ARL2-SNX15V9GYD0 113 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 M0R1B8 84 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 MMP23AO75900 390 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 IGKV1-16P04430 117 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 OR10J4P0C629 311 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 COMPP49747 757 aaPredicted RBP15.58■□□□□ 0.08
SCARF1-206ENST00000573852 SLC35B1P78383 322 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 TECRQ9NZ01 308 aaKnown RBP15.58■□□□□ 0.08
SCARF1-206ENST00000573852 ZNRD1Q9P1U0 126 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 PAM16Q9Y3D7 125 aa15.58■□□□□ 0.08
SCARF1-206ENST00000573852 GGTLC3B5MD39 225 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 OR7C2O60412 319 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 PRCDQ00LT1 54 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 SEM1Q6ZVN7 128 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 NAT8BQ9UHF3 227 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 PRNDQ9UKY0 176 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 YLPM1P49750 1951 aaKnown RBP15.57■□□□□ 0.08
SCARF1-206ENST00000573852 TRBV9A0A0B4J1U6 114 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 UPK2O00526 184 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 KLF3P57682 345 aaPredicted RBP15.57■□□□□ 0.08
SCARF1-206ENST00000573852 CX3CL1P78423 397 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 FAM169BQ8N8A8 192 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 ADTRPQ96IZ2 230 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 MIEN1Q9BRT3 115 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 NCOR1P1Q9H4R4 102 aa15.57■□□□□ 0.08
SCARF1-206ENST00000573852 TCL1AP56279 114 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 KIAA1644Q3SXP7 199 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 DEFB108BQ8NET1 73 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 FBXL7Q9UJT9 491 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 TEX50A0A1B0GTY4 177 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 IGLV2-8P01709 118 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 CT45A6P0DMU7 189 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 CT45A5P0DMU8 189 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 CT45A7P0DMV0 189 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 SUMO1P63165 101 aaKnown RBP15.56■□□□□ 0.08
SCARF1-206ENST00000573852 TMEM136Q6ZRR5 245 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 OR9G1Q8NH87 305 aa15.56■□□□□ 0.08
SCARF1-206ENST00000573852 FAM103A1Q9BTL3 118 aaKnown RBP15.56■□□□□ 0.08
SCARF1-206ENST00000573852 RAI1Q7Z5J4 1906 aaPredicted RBP15.55■□□□□ 0.08
SCARF1-206ENST00000573852 WT1P19544 449 aaPredicted RBP15.55■□□□□ 0.08
SCARF1-206ENST00000573852 IGFL2Q6UWQ7 119 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 FAM222BQ8WU58 562 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 OSTCQ9NRP0 149 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 ZNF257Q9Y2Q1 563 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 TRAV17A0A0B4J275 112 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 GPX1P07203 203 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 IRF2P14316 349 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 TIGITQ495A1 244 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 LOXL4Q96JB6 756 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 GCM1Q9NP62 436 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 RAB9BQ9NP90 201 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 BOD1L1Q8NFC6 3051 aa15.55■□□□□ 0.08
SCARF1-206ENST00000573852 OR5G3P0C626 314 aa15.54■□□□□ 0.08
SCARF1-206ENST00000573852 TMEM183BQ1AE95 376 aa15.54■□□□□ 0.08
SCARF1-206ENST00000573852 SIGLECL1Q8N7X8 197 aa15.54■□□□□ 0.08
SCARF1-206ENST00000573852 SLC35E1Q96K37 410 aa15.54■□□□□ 0.08
SCARF1-206ENST00000573852 VAMP8Q9BV40 100 aa15.54■□□□□ 0.08
SCARF1-206ENST00000573852 OR10W1Q8NGF6 305 aa15.54■□□□□ 0.08
SCARF1-206ENST00000573852 SNRNP40Q96DI7 357 aaKnown RBP15.54■□□□□ 0.08
SCARF1-206ENST00000573852 GAFA1Q96PS6 74 aa15.54■□□□□ 0.08
SCARF1-206ENST00000573852 CCL13Q99616 98 aa15.54■□□□□ 0.08
SCARF1-206ENST00000573852 SLC35D1Q9NTN3 355 aa15.54■□□□□ 0.08
SCARF1-206ENST00000573852 ZNF25P17030 456 aaPredicted RBP15.53■□□□□ 0.08
SCARF1-206ENST00000573852 GLRXP35754 106 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 STUMQ69YW2 141 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 RCHY1Q96PM5 261 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 BDP1A6H8Y1 2624 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 RNASE2P10153 161 aaKnown RBP15.53■□□□□ 0.08
SCARF1-206ENST00000573852 C2orf83Q53S99 150 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 MORN5Q5VZ52 161 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 WDR73Q6P4I2 378 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 FAM216BQ8N7L0 139 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 Q8N976 141 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 IGF2BP2-AS1Q96M15 143 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 RNF7Q9UBF6 113 aa15.53■□□□□ 0.08
SCARF1-206ENST00000573852 M0QZK8 103 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms