RNA–Protein interactions for RNA: ENST00000572844.1

POLR2A-201, Transcript of RNA polymerase II subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene POLR2A, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-201ENST00000572844 ROS1P08922 2347 aa13.21□□□□□ -0.3
POLR2A-201ENST00000572844 MT-CO2P00403 227 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 IGLV2-23P01705 113 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 SMIM6P0DI80 62 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 CD99P14209 185 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 GCHFRP30047 84 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 PPOXP50336 477 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 CST9LP1Q5W188 147 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 TGIF2LXQ8IUE1 241 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 MUC15Q8N387 334 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 SSX3Q99909 188 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 ATMQ13315 3056 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 FAM90A27PA6NNH2 459 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 H7BYZ3 331 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 RBP4P02753 201 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 HOXA5P20719 270 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 LGALS7P47929 136 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 ATP5G3P48201 142 aa13.2□□□□□ -0.3
POLR2A-201ENST00000572844 ZNF672Q499Z4 452 aaPredicted RBP13.2□□□□□ -0.3
POLR2A-201ENST00000572844 PIEZO2Q9H5I5 2752 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 REG1BP48304 166 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 UBE2G2P60604 165 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 GAMTQ14353 236 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 VMA21Q3ZAQ7 101 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 OR5B12Q96R08 314 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 CHODLQ9H9P2 273 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 SEPSECSQ9HD40 501 aaKnown RBP13.19□□□□□ -0.3
POLR2A-201ENST00000572844 SIAH2O43255 324 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 IGHV2-70P01814 119 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 S100PP25815 95 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 DIAPH2-AS1Q14236 149 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 HLA-DRB5Q30154 266 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 ZNF841Q6ZN19 808 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 OR51G1Q8NGK1 321 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 RNASEH2CQ8TDP1 164 aaKnown RBP13.19□□□□□ -0.3
POLR2A-201ENST00000572844 FUT9Q9Y231 359 aa13.19□□□□□ -0.3
POLR2A-201ENST00000572844 PKDREJQ9NTG1 2253 aa13.18□□□□□ -0.3
POLR2A-201ENST00000572844 AREGP15514 252 aa13.18□□□□□ -0.3
POLR2A-201ENST00000572844 SRP14P37108 136 aaKnown RBP13.18□□□□□ -0.3
POLR2A-201ENST00000572844 PRRX1P54821 245 aa13.18□□□□□ -0.3
POLR2A-201ENST00000572844 OR10W1Q8NGF6 305 aa13.18□□□□□ -0.3
POLR2A-201ENST00000572844 C8orf46Q8TAG6 207 aa13.18□□□□□ -0.3
POLR2A-201ENST00000572844 SRD5A3Q9H8P0 318 aa13.18□□□□□ -0.3
POLR2A-201ENST00000572844 PHOX2AO14813 284 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 NDUFB4O95168 129 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 TRGC2P03986 189 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 S100A9P06702 114 aaKnown RBP13.17□□□□□ -0.3
POLR2A-201ENST00000572844 COL8A2P25067 703 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 GALR1P47211 349 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 SUB1P53999 127 aaKnown RBP eCLIP13.17□□□□□ -0.3
POLR2A-201ENST00000572844 LINC01551Q86U37 167 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 TEX45Q8NA69 505 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 IGKV1OR2-108A0A075B7D4 117 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 CGB1A6NKQ9 187 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 PPP1R2P9O14990 202 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST1H2BKO60814 126 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST1H2BJP06899 126 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST1H2BOP23527 126 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST1H2BBP33778 126 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST1H2BDP58876 126 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST1H2BCP62807 126 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 ADORA2A-AS1P86434 159 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST2H2BEQ16778 126 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.17□□□□□ -0.3
POLR2A-201ENST00000572844 SPATA31B1PQ5VZV4 182 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 SLC16A13Q7RTY0 426 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST1H2BHQ93079 126 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 C11orf52Q96A22 123 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST1H2BNQ99877 126 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 HIST1H2BMQ99879 126 aa13.17□□□□□ -0.3
POLR2A-201ENST00000572844 ZNF430Q9H8G1 570 aaPredicted RBP13.17□□□□□ -0.3
POLR2A-201ENST00000572844 TLN1Q9Y490 2541 aaKnown RBP13.16□□□□□ -0.3
POLR2A-201ENST00000572844 IGLV1-47P01700 117 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 OR5G3P0C626 314 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 GRNP28799 593 aaKnown RBP13.16□□□□□ -0.3
POLR2A-201ENST00000572844 OR10J1P30954 320 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 CDX1P47902 265 aaPredicted RBP13.16□□□□□ -0.3
POLR2A-201ENST00000572844 BEND2Q8NDZ0 799 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 IMMP2LQ96T52 175 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 TMEM167BQ9NRX6 74 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 TECRQ9NZ01 308 aaKnown RBP13.16□□□□□ -0.3
POLR2A-201ENST00000572844 YTHDF2Q9Y5A9 579 aaKnown RBP13.16□□□□□ -0.3
POLR2A-201ENST00000572844 IGHV2-26A0A0B4J1V2 119 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 GGCTO75223 188 aaKnown RBP13.16□□□□□ -0.3
POLR2A-201ENST00000572844 FAM78BQ5VT40 261 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 MRPL41Q8IXM3 137 aaKnown RBP13.16□□□□□ -0.3
POLR2A-201ENST00000572844 OR4P4Q8NGL7 312 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 RNF2Q99496 336 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 IGF2RP11717 2491 aa13.16□□□□□ -0.3
POLR2A-201ENST00000572844 E7EUB6 86 aa13.15□□□□□ -0.3
POLR2A-201ENST00000572844 NDUFA6P56556 154 aa13.15□□□□□ -0.3
POLR2A-201ENST00000572844 S100A12P80511 92 aa13.15□□□□□ -0.3
POLR2A-201ENST00000572844 WT1-ASQ06250 92 aa13.15□□□□□ -0.3
POLR2A-201ENST00000572844 MRGPRG-AS1Q2M3A8 158 aa13.15□□□□□ -0.3
POLR2A-201ENST00000572844 PVRIGQ6DKI7 326 aa13.15□□□□□ -0.3
POLR2A-201ENST00000572844 PQLC2Q6ZP29 291 aa13.15□□□□□ -0.3
POLR2A-201ENST00000572844 MIR17HGQ75NE6 70 aa13.15□□□□□ -0.3
POLR2A-201ENST00000572844 MOB3BQ86TA1 216 aa13.15□□□□□ -0.3
POLR2A-201ENST00000572844 BTF3L4Q96K17 158 aa13.15□□□□□ -0.3
POLR2A-201ENST00000572844 UHRF2Q96PU4 802 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms