RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 OR4A16Q8NH70 328 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 LSM10Q969L4 123 aaKnown RBP7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 EEF1AKMT3Q96AZ1 226 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 ZNF414Q96IQ9 312 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 ASCL2Q99929 193 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 B9D2Q9BPU9 175 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 FKBP11Q9NYL4 201 aa7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 F11RQ9Y624 299 aaKnown RBP7.77□□□□□ -1.17
GTF3C1-213ENST00000571886 TEX13DA0A0J9YY54 714 aaPredicted RBP7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 F8W735 103 aaPredicted RBP7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 K7EIM0 57 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 ST8SIA3O43173 380 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 DHFRP00374 187 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 GPR183P32249 361 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 ARL3P36405 182 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 HSPE1P61604 102 aaKnown RBP7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 PRCDQ00LT1 54 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 TATDN3Q17R31 274 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 TRIM16LQ309B1 348 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 THOC7Q6I9Y2 204 aaKnown RBP7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 UNQ9165/PRO28630Q6UXU0 137 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 SELENOHQ8IZQ5 122 aaKnown RBP7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 OR2C3Q8N628 320 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 CCDC71LQ8N9Z2 235 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 OR5B3Q8NH48 314 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 SCARB1Q8WTV0 552 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 CACNG8Q8WXS5 425 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 PPP1R14BQ96C90 147 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 NAA60Q9H7X0 242 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 PALMDQ9NP74 551 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 MCUBQ9NWR8 336 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 SLC2A8Q9NY64 477 aa7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 C14orf166Q9Y224 244 aaKnown RBP7.76□□□□□ -1.17
GTF3C1-213ENST00000571886 TRBV7-1A0A0A6YYK4 115 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 CRYM-AS1A6NIL9 109 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 C2orf70A6NJV1 201 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 CDS2O95674 445 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 IGHV3-48P01763 117 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 CD69Q07108 199 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 SURF2Q15527 256 aaPredicted RBP7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 HSD17B13Q7Z5P4 300 aaPredicted RBP7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 GPHB5Q86YW7 130 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 Q8N402 240 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 GPR146Q96CH1 333 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 CXorf58Q96LI9 332 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 TMEM56Q96MV1 263 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 SDHCQ99643 169 aaPredicted RBP7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 PRRT1Q99946 306 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 TMEM222Q9H0R3 208 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 SIGLEC8Q9NYZ4 499 aa7.75□□□□□ -1.17
GTF3C1-213ENST00000571886 TMEM213A2RRL7 107 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 OR2T8A6NH00 312 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 ZNF785A8K8V0 405 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 I3L2K1 104 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 LGALS9O00182 355 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 FOLR2P14207 255 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 S100A5P33763 92 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 ETV6P41212 452 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 AKR1C2P52895 323 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 SUPT4H1P63272 117 aaKnown RBP7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 TMEM187Q14656 261 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 BAK1Q16611 211 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 DEFB114Q30KQ6 69 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 CD300EQ496F6 205 aaPredicted RBP7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 TM4SF20Q53R12 229 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 FAM209BQ5JX69 171 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 OR1P1Q8NH06 330 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 VN1R17PQ8TDU5 208 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 CHRDL1Q9BU40 450 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 SRRQ9GZT4 340 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 PEMTQ9UBM1 199 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 SCP2D1Q9UJQ7 156 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 SMAD5-AS1Q9Y6J3 95 aa7.74□□□□□ -1.17
GTF3C1-213ENST00000571886 ZNF320A2RRD8 509 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 TGOLN2O43493 480 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 AKR1C4P17516 323 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 CBLN1P23435 193 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 ADMP35318 185 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 DHODHQ02127 395 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 MLANAQ16655 118 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 TMEM268Q5VZI3 342 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 PLET1Q6UQ28 207 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 Q6ZNX1 250 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 SBSPONQ8IVN8 264 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 TOMM5Q8N4H5 51 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 RBPMSQ93062 196 aaKnown RBP7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 MISP3Q96FF7 219 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 ZNF436Q9C0F3 470 aaPredicted RBP7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 C21orf62Q9NYP8 219 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 THYN1Q9P016 225 aa7.73□□□□□ -1.17
GTF3C1-213ENST00000571886 IGHV3OR16-8A0A075B7F1 116 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 B3GALNT1O75752 331 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 NXPH3O95157 252 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 MT-CO2P00403 227 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 IFNA17P01571 189 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 FRMD6-AS1P0C7T7 363 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 RNASE2P10153 161 aaKnown RBP7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 ERHP84090 104 aaKnown RBP7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 FAM106AQ4KMX7 169 aa7.72□□□□□ -1.17
GTF3C1-213ENST00000571886 SGPP2Q8IWX5 399 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms