RNA–Protein interactions for RNA: ENST00000571263.2

CDRT1-206, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best)

Gene CDRT1, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-206ENST00000571263 HILS1P60008 231 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 EIF5AP63241 154 aaKnown RBP9.43□□□□□ -0.9
CDRT1-206ENST00000571263 SSBP2P81877 361 aaPredicted RBP9.43□□□□□ -0.9
CDRT1-206ENST00000571263 EWSR1Q01844 656 aaKnown RBP eCLIP9.43□□□□□ -0.9
CDRT1-206ENST00000571263 WT1-ASQ06250 92 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 LGALSLQ3ZCW2 172 aaPredicted RBP9.43□□□□□ -0.9
CDRT1-206ENST00000571263 FBLN7Q53RD9 439 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 SPINK9Q5DT21 86 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 C9orf152Q5JTZ5 239 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 OR10W1Q8NGF6 305 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 OR1S2Q8NGQ3 325 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 OR1P1Q8NH06 330 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 GRPEL2Q8TAA5 225 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 ITPR3Q14573 2671 aa9.43□□□□□ -0.9
CDRT1-206ENST00000571263 CCDC168Q8NDH2 2452 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 RPS10-NUDT3A0A1W2PQS6 291 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 RNF222A6NCQ9 220 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 FNDC10F2Z333 226 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 BOLA2-SMG1P6H3BVE0 249 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 IFNA4P05014 189 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 RNASE1P07998 156 aaKnown RBP9.42□□□□□ -0.9
CDRT1-206ENST00000571263 RNASE2P10153 161 aaKnown RBP9.42□□□□□ -0.9
CDRT1-206ENST00000571263 DEFA4P12838 97 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 CTRB1P17538 263 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 GPX4P36969 197 aaPredicted RBP9.42□□□□□ -0.9
CDRT1-206ENST00000571263 BLCAPP62952 87 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 EXOSC2Q13868 293 aaKnown RBP9.42□□□□□ -0.9
CDRT1-206ENST00000571263 C10orf55Q5SWW7 151 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 PVRIGQ6DKI7 326 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 CTRB2Q6GPI1 263 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 UNQ5815/PRO19632Q6UWF5 114 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 ETV3LQ6ZN32 361 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 C9orf62Q8N4C0 152 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 CACNG8Q8WXS5 425 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 ARPC5LQ9BPX5 153 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 GSX1Q9H4S2 264 aaPredicted RBP9.42□□□□□ -0.9
CDRT1-206ENST00000571263 PARP11Q9NR21 331 aa9.42□□□□□ -0.9
CDRT1-206ENST00000571263 PAIP2BQ9ULR5 123 aaKnown RBP9.42□□□□□ -0.9
CDRT1-206ENST00000571263 F11RQ9Y624 299 aaKnown RBP9.42□□□□□ -0.9
CDRT1-206ENST00000571263 BORCS7-ASMTA0A0B4J1R7 106 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 TRAV41A0A0B4J266 112 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 A0A1B0GW64 132 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 IGSF23A1L1A6 192 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 DNAJC9-AS1A6NH13 148 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 C15orf62A8K5M9 175 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 H3BP45 60 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 H3BUA1 57 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 ATP6V0E1O15342 81 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 TCF21O43680 179 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 JTBO76095 146 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 METTL15P1P0C7V9 234 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 EGR2P11161 476 aaPredicted RBP9.41□□□□□ -0.9
CDRT1-206ENST00000571263 CXCL2P19875 107 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 ZNF266Q14584 549 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 KLK9Q2XQG4 91 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 ARSJQ5FYB0 599 aaPredicted RBP9.41□□□□□ -0.9
CDRT1-206ENST00000571263 TMUB2Q71RG4 321 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 Q8N2B8 174 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 LFNGQ8NES3 379 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 FAM110DQ8TAY7 271 aaPredicted RBP9.41□□□□□ -0.9
CDRT1-206ENST00000571263 P2RX4Q99571 388 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 HSPB9Q9BQS6 159 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 WNT10AQ9GZT5 417 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 ARL6Q9H0F7 186 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 TNFRSF19Q9NS68 423 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 KLK9Q9UKQ9 250 aa9.41□□□□□ -0.9
CDRT1-206ENST00000571263 TMEM89A2RUT3 159 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 PMS2P5A8MQ11 134 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 BCL2L11O43521 198 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 FBXO24O75426 580 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 CST7O76096 145 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 AREGP15514 252 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 SLC35B1P78383 322 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 DLK1P80370 383 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 NHLH2Q02577 135 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 SLC25A24Q6NUK1 477 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 LILRB2Q8N423 598 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 OR4C12Q96R67 309 aa9.4□□□□□ -0.9
CDRT1-206ENST00000571263 FAM103A1Q9BTL3 118 aaKnown RBP9.4□□□□□ -0.9
CDRT1-206ENST00000571263 IFNA5P01569 189 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 UBA52P62987 128 aaKnown RBP9.39□□□□□ -0.91
CDRT1-206ENST00000571263 NDPQ00604 133 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 SLC38A11Q08AI6 406 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 OPCMLQ14982 345 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 LAMTOR1Q6IAA8 161 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 OR8G2PQ6IF36 304 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 Q71RC1 249 aaPredicted RBP9.39□□□□□ -0.91
CDRT1-206ENST00000571263 SLC51BQ86UW2 128 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 OR5C1Q8NGR4 320 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 OR2T6Q8NHC8 308 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 PARD6GQ9BYG4 376 aaPredicted RBP9.39□□□□□ -0.91
CDRT1-206ENST00000571263 SLA2Q9H6Q3 261 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 NPVFQ9HCQ7 196 aa9.39□□□□□ -0.91
CDRT1-206ENST00000571263 MYO9AB2RTY4 2548 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 SOX15O60248 233 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 MPDU1O75352 247 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 SCGB2A1O75556 95 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 NKX2-5P52952 324 aaPredicted RBP9.38□□□□□ -0.91
CDRT1-206ENST00000571263 CD69Q07108 199 aa9.38□□□□□ -0.91
CDRT1-206ENST00000571263 RAB31Q13636 194 aa9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms