RNA–Protein interactions for RNA: ENST00000570902.1

SCARF1-204, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 1,060 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-204ENST00000570902 POU2AF1Q16633 256 aa13.98□□□□□ -0.17
SCARF1-204ENST00000570902 HSD17B13Q7Z5P4 300 aaPredicted RBP13.98□□□□□ -0.17
SCARF1-204ENST00000570902 CLVS1Q8IUQ0 354 aaPredicted RBP13.98□□□□□ -0.17
SCARF1-204ENST00000570902 GDPD1Q8N9F7 314 aa13.98□□□□□ -0.17
SCARF1-204ENST00000570902 ZBTB34Q8NCN2 500 aa13.98□□□□□ -0.17
SCARF1-204ENST00000570902 CD300LFQ8TDQ1 290 aa13.98□□□□□ -0.17
SCARF1-204ENST00000570902 C20orf24Q9BUV8 137 aa13.98□□□□□ -0.17
SCARF1-204ENST00000570902 C11orf68Q9H3H3 251 aaKnown RBP13.98□□□□□ -0.17
SCARF1-204ENST00000570902 FBXL17Q9UF56 701 aa13.98□□□□□ -0.17
SCARF1-204ENST00000570902 SMIM31A0A1B0GVY4 71 aa13.97□□□□□ -0.17
SCARF1-204ENST00000570902 HPRT1P00492 218 aa13.97□□□□□ -0.17
SCARF1-204ENST00000570902 CTSDP07339 412 aaPredicted RBP13.97□□□□□ -0.17
SCARF1-204ENST00000570902 ZNF182P17025 639 aaPredicted RBP13.97□□□□□ -0.17
SCARF1-204ENST00000570902 NANOS2P60321 138 aaKnown RBP13.97□□□□□ -0.17
SCARF1-204ENST00000570902 CATR1Q13166 79 aa13.97□□□□□ -0.17
SCARF1-204ENST00000570902 C2CD4CQ8TF44 421 aa13.97□□□□□ -0.17
SCARF1-204ENST00000570902 AP3S1Q92572 193 aa13.97□□□□□ -0.17
SCARF1-204ENST00000570902 SLC5A7Q9GZV3 580 aa13.97□□□□□ -0.17
SCARF1-204ENST00000570902 EHFQ9NZC4 300 aa13.97□□□□□ -0.17
SCARF1-204ENST00000570902 C15orf62A8K5M9 175 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 PMP2P02689 132 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 RFX2P48378 723 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 SPCS2Q15005 226 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 SLC25A24Q6NUK1 477 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 MZT2AQ6P582 158 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 TMEM17Q86X19 198 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 APRG1Q8IVJ8 170 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 DMBX1Q8NFW5 382 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 TMEM140Q9NV12 185 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 C21orf62Q9NYP8 219 aa13.96□□□□□ -0.17
SCARF1-204ENST00000570902 TRAV3A0A0B4J244 114 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 FAM25AB3EWG3 89 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 FAM25CB3EWG5 89 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 FAM25GB3EWG6 89 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 SULT1C2O00338 296 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 SERPINE2P07093 398 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 TRAPPC2P0DI81 140 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 TRAPPC2BP0DI82 140 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 OR13C7P0DN81 318 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 ADMP35318 185 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 RPL5P46777 297 aaKnown RBP13.95□□□□□ -0.18
SCARF1-204ENST00000570902 PRR20EP86478 221 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 PRR20CP86479 221 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 PRR20DP86480 221 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 PRR20BP86481 221 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 PRR20AP86496 221 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 SNX29P2Q8IUI4 249 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 OR10W1Q8NGF6 305 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 OR11H2Q8NH07 326 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 GIMAP1Q8WWP7 306 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 VPS13DQ5THJ4 4388 aa13.95□□□□□ -0.18
SCARF1-204ENST00000570902 KIAA1109Q2LD37 5005 aa13.94□□□□□ -0.18
SCARF1-204ENST00000570902 ZNF207O43670 478 aaKnown RBP13.94□□□□□ -0.18
SCARF1-204ENST00000570902 HLA-DMAP28067 261 aa13.94□□□□□ -0.18
SCARF1-204ENST00000570902 HERV-K104P61576 105 aa13.94□□□□□ -0.18
SCARF1-204ENST00000570902 OR5H2Q8NGV7 314 aa13.94□□□□□ -0.18
SCARF1-204ENST00000570902 RAB2BQ8WUD1 216 aa13.94□□□□□ -0.18
SCARF1-204ENST00000570902 CHRDL1Q9BU40 450 aa13.94□□□□□ -0.18
SCARF1-204ENST00000570902 PLEKHA2Q9HB19 425 aa13.94□□□□□ -0.18
SCARF1-204ENST00000570902 SMPXQ9UHP9 88 aa13.94□□□□□ -0.18
SCARF1-204ENST00000570902 ANAPC10Q9UM13 185 aa13.94□□□□□ -0.18
SCARF1-204ENST00000570902 IGHV3OR16-8A0A075B7F1 116 aa13.93□□□□□ -0.18
SCARF1-204ENST00000570902 TMBIM6P55061 237 aa13.93□□□□□ -0.18
SCARF1-204ENST00000570902 TAS2R46P59540 309 aa13.93□□□□□ -0.18
SCARF1-204ENST00000570902 WT1-ASQ06250 92 aa13.93□□□□□ -0.18
SCARF1-204ENST00000570902 UBAC2Q8NBM4 344 aa13.93□□□□□ -0.18
SCARF1-204ENST00000570902 OR1L8Q8NGR8 309 aa13.93□□□□□ -0.18
SCARF1-204ENST00000570902 GPX8Q8TED1 209 aa13.93□□□□□ -0.18
SCARF1-204ENST00000570902 SCARB1Q8WTV0 552 aa13.93□□□□□ -0.18
SCARF1-204ENST00000570902 RNF2Q99496 336 aa13.93□□□□□ -0.18
SCARF1-204ENST00000570902 ZNF2Q9BSG1 426 aaPredicted RBP13.93□□□□□ -0.18
SCARF1-204ENST00000570902 COMMD9Q9P000 198 aa13.93□□□□□ -0.18
SCARF1-204ENST00000570902 F11RQ9Y624 299 aaKnown RBP13.93□□□□□ -0.18
SCARF1-204ENST00000570902 NAT1P18440 290 aa13.92□□□□□ -0.18
SCARF1-204ENST00000570902 ERVK-16P61578 105 aa13.92□□□□□ -0.18
SCARF1-204ENST00000570902 RELQ04864 619 aaPredicted RBP13.92□□□□□ -0.18
SCARF1-204ENST00000570902 Q56UQ5 140 aa13.92□□□□□ -0.18
SCARF1-204ENST00000570902 ZNF818PQ6ZRF7 136 aa13.92□□□□□ -0.18
SCARF1-204ENST00000570902 LYSMD2Q8IV50 215 aa13.92□□□□□ -0.18
SCARF1-204ENST00000570902 TMEM116Q8NCL8 245 aa13.92□□□□□ -0.18
SCARF1-204ENST00000570902 LSM10Q969L4 123 aaKnown RBP13.92□□□□□ -0.18
SCARF1-204ENST00000570902 RHPN1-AS1Q9BWJ2 59 aa13.92□□□□□ -0.18
SCARF1-204ENST00000570902 SCPEP1Q9HB40 452 aa13.92□□□□□ -0.18
SCARF1-204ENST00000570902 IGHV3-21A0A0B4J1V1 117 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 IGHV7-4-1A0A0J9YVY3 117 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 TEX50A0A1B0GTY4 177 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 F8W735 103 aaPredicted RBP13.91□□□□□ -0.18
SCARF1-204ENST00000570902 CHEK1O14757 476 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 HRH1P35367 487 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 ZNF124Q15973 351 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 RNASE12Q5GAN4 147 aaKnown RBP13.91□□□□□ -0.18
SCARF1-204ENST00000570902 DHRS11Q6UWP2 260 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 OR51H1Q8NH63 302 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 BCL7BQ9BQE9 202 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 NDUFA4L2Q9NRX3 87 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 EXTL2Q9UBQ6 330 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 DNAH6Q9C0G6 4158 aa13.91□□□□□ -0.18
SCARF1-204ENST00000570902 C11orf94C9JXX5 98 aa13.9□□□□□ -0.18
SCARF1-204ENST00000570902 CA1P00915 261 aaPredicted RBP13.9□□□□□ -0.18
SCARF1-204ENST00000570902 GNRHRP30968 328 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms