RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 MFNGO00587 321 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 DENRO43583 198 aaKnown RBP7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 EMP1P54849 157 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 WNT4P56705 351 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 RCN1Q15293 331 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 C2orf76Q3KRA6 126 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 ACTL10Q5JWF8 245 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 Q5VSD8 79 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 C10orf67Q8IYJ2 551 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 MS4A15Q8N5U1 240 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 FAM3DQ96BQ1 224 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 CENPOQ9BU64 300 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 C9orf16Q9BUW7 83 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 NXF2Q9GZY0 626 aaKnown RBP7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 AK6Q9Y3D8 172 aaKnown RBP7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 TMED3Q9Y3Q3 217 aa7.38□□□□□ -1.23
CTDNEP1-202ENST00000570380 TMEM272A0A1B0GTI8 110 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 TEX50A0A1B0GTY4 177 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 K7EQG2 157 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 EIF4EP06730 217 aaKnown RBP7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 UCHL1P09936 223 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 ZNF688P0C7X2 276 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 TRAPPC2P0DI81 140 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 TRAPPC2BP0DI82 140 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 HTN3P15516 51 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 RAB11BQ15907 218 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 POU2AF1Q16633 256 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 TMEM88Q6PEY1 159 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 ZNF773Q6PK81 442 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 HSD17B13Q7Z5P4 300 aaPredicted RBP7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 LYPD1Q8N2G4 141 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 ZNRF2Q8NHG8 242 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 GRAMD2BQ96HH9 432 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 AIFM2Q9BRQ8 373 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 XCL2Q9UBD3 114 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 DKK2Q9UBU2 259 aa7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 ELF5Q9UKW6 265 aaPredicted RBP7.37□□□□□ -1.23
CTDNEP1-202ENST00000570380 HIST1H1DP16402 221 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 TAS2R31P59538 309 aa7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 THOC7Q6I9Y2 204 aaKnown RBP7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 TOMM20LQ6UXN7 152 aa7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 SPAG16Q8N0X2 631 aa7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 NANOGP1Q8N7R0 232 aa7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 OR10R2Q8NGX6 335 aa7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 GINS3Q9BRX5 216 aa7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 NIPSNAP3BQ9BS92 247 aa7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 NDUFA4L2Q9NRX3 87 aa7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 TMEM140Q9NV12 185 aa7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 RAB22AQ9UL26 194 aa7.36□□□□□ -1.23
CTDNEP1-202ENST00000570380 MYL12BO14950 172 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 TNFSF12O43508 249 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 IGHV3-48P01763 117 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 FGF2P09038 288 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 NQO2P16083 231 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 TALDO1P37837 337 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 MFAP4P55083 255 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 XGP55808 180 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 FAM222AQ5U5X8 452 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 ZNF705AQ6ZN79 300 aaPredicted RBP7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 STXBP6Q8NFX7 210 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 OR1L8Q8NGR8 309 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 DCANP1Q8TF63 244 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 SLC25A46Q96AG3 418 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 RAB40CQ96S21 281 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 NEU1Q99519 415 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 ATG101Q9BSB4 218 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 HINT2Q9BX68 163 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 C1QTNF4Q9BXJ3 329 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 DCSTAMPQ9H295 470 aa7.35□□□□□ -1.23
CTDNEP1-202ENST00000570380 TMEM189A5PLL7 270 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 I3L2K1 104 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 SULT1C2O00338 296 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 RBFOX2O43251 390 aaKnown RBP eCLIP7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 HPRT1P00492 218 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 CTXN2P0C2S0 81 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 GADD45AP24522 165 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 OXA1LQ15070 435 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 ZNF555Q8NEP9 628 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 DMBX1Q8NFW5 382 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 FRZBQ92765 325 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 LSM10Q969L4 123 aaKnown RBP7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 TXN2Q99757 166 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 ZFAND3Q9H8U3 227 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 CCL28Q9NRJ3 127 aa7.34□□□□□ -1.23
CTDNEP1-202ENST00000570380 SMIM9A6NGZ8 99 aa7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 ZNF705FA8MVS1 300 aaPredicted RBP7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 CASQ2O14958 399 aaPredicted RBP7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 ZNF705DP0CH99 300 aaPredicted RBP7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 ZNF705BP0CI00 300 aaPredicted RBP7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 DTYMKP23919 212 aa7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 HES5Q5TA89 166 aa7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 OGFRL1Q5TC84 451 aaPredicted RBP7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 TMEM91Q6ZNR0 172 aa7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 C15orf53Q8NAA6 179 aa7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 MDFICQ9P1T7 246 aa7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 PUS1Q9Y606 427 aaKnown RBP eCLIP7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 HMCN2Q8NDA2 5059 aa7.33□□□□□ -1.24
CTDNEP1-202ENST00000570380 A0A1B0GU03 582 aa7.32□□□□□ -1.24
CTDNEP1-202ENST00000570380 TEX48A0A1B0GUV7 120 aa7.32□□□□□ -1.24
CTDNEP1-202ENST00000570380 J3QL48 77 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms