RNA–Protein interactions for RNA: ENST00000569990.2

HCCAT5-201, hepatocellular carcinoma associated transcript 5, humanhuman

TSL 1 (best) BASIC

Gene HCCAT5, Length 1,079 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCCAT5-201ENST00000569990 SLURP1P55000 103 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 HSPE1P61604 102 aaKnown RBP7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 PRCDQ00LT1 54 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 DEFA6Q01524 100 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 ATP5G2Q06055 141 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 EXOSC2Q13868 293 aaKnown RBP7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 C15orf32Q32M92 178 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 TMEM128Q5BJH2 165 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 TMEM268Q5VZI3 342 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 TMED4Q7Z7H5 227 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 ZNF429Q86V71 674 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 FAM219AQ8IW50 185 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 RNASE11Q8TAA1 199 aaKnown RBP7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 S100ZQ8WXG8 99 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 IL22RA2Q969J5 263 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 C7orf50Q9BRJ6 194 aaKnown RBP7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 MCRIP2Q9BUT9 160 aaKnown RBP7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 CCDC32Q9BV29 185 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 RANGRFQ9HD47 186 aaPredicted RBP7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 PRR13Q9NZ81 148 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 PEF1Q9UBV8 284 aaKnown RBP7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 DMRT1Q9Y5R6 373 aa7.38□□□□□ -1.23
HCCAT5-201ENST00000569990 CENPXA8MT69 81 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 PLA2G10O15496 165 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 ST8SIA3O43173 380 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 NDUFB6O95139 128 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 ANXA3P12429 323 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 HOXD3P31249 432 aaPredicted RBP7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 BTCP35070 178 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 Q6ZRM9 215 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 CENPSQ8N2Z9 138 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 SLC35G3Q8N808 338 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 DCUN1D4Q92564 292 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 DLX4Q92988 240 aaPredicted RBP7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 GPR61Q9BZJ8 451 aa7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 F11RQ9Y624 299 aaKnown RBP7.37□□□□□ -1.23
HCCAT5-201ENST00000569990 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 A0A0B4J2A0 478 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 MFSD2BA6NFX1 497 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 SEC14L6B5MCN3 397 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 OVOL1O14753 267 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 CYB5BO43169 146 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 ZP3P21754 424 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 VAMP1P23763 118 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 MECP2P51608 486 aaKnown RBP7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 MFAP2P55001 183 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 SRPXP78539 464 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 AARDQ4LEZ3 155 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 SPINK9Q5DT21 86 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 NMSQ5H8A3 153 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 FAM209BQ5JX69 171 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 C9orf66Q5T8R8 295 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 LGI3Q8N145 548 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 OR2C3Q8N628 320 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 GPR146Q96CH1 333 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 CCDC140Q96MF4 163 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 PLEKHA3Q9HB20 300 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 THYN1Q9P016 225 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 CACNG5Q9UF02 275 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 SHPKQ9UHJ6 478 aa7.36□□□□□ -1.23
HCCAT5-201ENST00000569990 INS-IGF2F8WCM5 200 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 BMPR1BO00238 502 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 LYRM1O43325 122 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 IFNA17P01571 189 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 IGHV3-23P01764 117 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 UBE2MP61081 183 aaKnown RBP7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 EGFEM1PQ0D2K5 195 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 PPP1R1AQ13522 171 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 KLF5Q13887 457 aaPredicted RBP7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 ANKRD55Q3KP44 614 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 SLC25A24Q6NUK1 477 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 LYZL2Q7Z4W2 148 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 LRTM2Q8N967 370 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 ZNF114Q8NC26 417 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 OR1L6Q8NGR2 347 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 OR1P1Q8NH06 330 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 EEF1AKMT3Q96AZ1 226 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 CXorf58Q96LI9 332 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 PDCD10Q9BUL8 212 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 WDR12Q9GZL7 423 aaKnown RBP7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 FLVCR2Q9UPI3 526 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 S4R3C0 116 aa7.35□□□□□ -1.23
HCCAT5-201ENST00000569990 TRBV7-1A0A0A6YYK4 115 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 PIGBOS1A0A0B4J2F0 54 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 DUXBA0A1W2PPF3 345 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 PPP5D1E7EU14 171 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 K7EIM0 57 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 SFT2D2O95562 160 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 PRB2P02812 416 aaPredicted RBP7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 SULT1A3P0DMM9 295 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 SULT1A4P0DMN0 295 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 SPCS3P61009 180 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 ERHP84090 104 aaKnown RBP7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 ZNF846Q147U1 533 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 RPEL1Q2QD12 228 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 PDLIM3Q53GG5 364 aaPredicted RBP7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 ACSM6Q6P461 480 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 CLEC19AQ6UXS0 136 aa7.34□□□□□ -1.23
HCCAT5-201ENST00000569990 OR52E5Q8NH55 327 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms