RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 ZNF488Q96MN9 340 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 GAFA1Q96PS6 74 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 HOPXQ9BPY8 73 aaPredicted RBP2.31□□□□□ -2.04
CNOT1-221ENST00000569924 PDCD1LG2Q9BQ51 273 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 SOSTQ9BQB4 213 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 NRIP2Q9BQI9 281 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 C20orf144Q9BQM9 153 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 SULT4A1Q9BR01 284 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 RTL8AQ9BWD3 113 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 PARD6GQ9BYG4 376 aaPredicted RBP2.31□□□□□ -2.04
CNOT1-221ENST00000569924 SLIRPQ9GZT3 109 aaKnown RBP2.31□□□□□ -2.04
CNOT1-221ENST00000569924 OR52D1Q9H346 318 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 ABCB9Q9NP78 766 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 SAR1AQ9NR31 198 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 USE1Q9NZ43 259 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 SLC7A11Q9UPY5 501 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 FAM32AQ9Y421 112 aaKnown RBP2.31□□□□□ -2.04
CNOT1-221ENST00000569924 MPC1Q9Y5U8 109 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 F11RQ9Y624 299 aaKnown RBP2.31□□□□□ -2.04
CNOT1-221ENST00000569924 DNAH7Q8WXX0 4024 aa2.31□□□□□ -2.04
CNOT1-221ENST00000569924 DYNC2H1Q8NCM8 4307 aaKnown RBP2.31□□□□□ -2.04
CNOT1-221ENST00000569924 IGKV1D-17A0A075B6S4 117 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 A0A0J9YXY3 114 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 FAM240AA0A1B0GVK7 77 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 DHRS12A0PJE2 317 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 A6NDX4 124 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 OR2AT4A6NND4 320 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 ZNF878C9JN71 531 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 TNFRSF11BO00300 401 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 ANGPTL7O43827 346 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 ORM1P02763 201 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 CD28P10747 220 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 SLC2A1P11166 492 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 FOLR2P14207 255 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 RAB3AP20336 220 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 HLA-DMAP28067 261 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 PYCR1P32322 319 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 IFNGR2P38484 337 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 CEACAM6P40199 344 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 MEOX2P50222 304 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 OR10A3P58181 314 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 OR12D2P58182 307 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 PRB3Q04118 309 aaPredicted RBP2.3□□□□□ -2.04
CNOT1-221ENST00000569924 REG3AQ06141 175 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 TSPAN31Q12999 210 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 PRDX4Q13162 271 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 MADCAM1Q13477 382 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 KIR2DS1Q14954 304 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 LY6EQ16553 131 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 GUCA2BQ16661 112 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 KLHL12Q53G59 568 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 OR10J3Q5JRS4 329 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 THOC7Q6I9Y2 204 aaKnown RBP2.3□□□□□ -2.04
CNOT1-221ENST00000569924 RPL13AP3Q6NVV1 102 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 ZNF493Q6ZR52 646 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 TMEM179BQ7Z7N9 219 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 CALHM1Q8IU99 346 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 MKXQ8IYA7 352 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 LYG1Q8N1E2 194 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 LINC00471Q8N535 108 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 KLHL30-AS1Q8NEE0 82 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 LFNGQ8NES3 379 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 DYNC2LI1Q8TCX1 351 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 GNPDA2Q8TDQ7 276 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 RNF133Q8WVZ7 376 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 OR5P3Q8WZ94 311 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 H1FXQ92522 213 aaKnown RBP2.3□□□□□ -2.04
CNOT1-221ENST00000569924 CREB3L1Q96BA8 519 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 SLAMF6Q96DU3 332 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 REEP6Q96HR9 211 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 FAM19A4Q96LR4 140 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 RDH12Q96NR8 316 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 B9D2Q9BPU9 175 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 NXF2Q9GZY0 626 aaKnown RBP2.3□□□□□ -2.04
CNOT1-221ENST00000569924 MED4Q9NPJ6 270 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 C19orf12Q9NSK7 152 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 PLEKHJ1Q9NW61 149 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 RASL12Q9NYN1 266 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 ZNF391Q9UJN7 358 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 ZNF222Q9UK12 451 aa2.3□□□□□ -2.04
CNOT1-221ENST00000569924 TBL2Q9Y4P3 447 aaKnown RBP2.3□□□□□ -2.04
CNOT1-221ENST00000569924 TRAV8-4A0A0B4J246 113 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 WI2-2373I1.2A0A1W2PRP0 233 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 ZNF850A8MQ14 1090 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 ODF3BA8MYP8 253 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 H0Y9J4 135 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 SYNGR1O43759 233 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 GADD45GO95257 159 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 P01737 135 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 RBP4P02753 201 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 TFF1P04155 84 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 HSPB1P04792 205 aaKnown RBP2.29□□□□□ -2.04
CNOT1-221ENST00000569924 GIPP09681 153 aaPredicted RBP2.29□□□□□ -2.04
CNOT1-221ENST00000569924 OCM2P0CE71 109 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 LIMS3P0CW19 117 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 LIMS4P0CW20 117 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 PSG2P11465 335 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 COX4I1P13073 169 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 SPI1P17947 270 aa2.29□□□□□ -2.04
CNOT1-221ENST00000569924 RCC1P18754 421 aaPredicted RBP2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms