RNA–Protein interactions for RNA: ENST00000569764.1

SMG1-217, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 4,187 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-217ENST00000569764 PHYHIPLQ96FC7 376 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 C4orf45Q96LM5 186 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 SLC25A31Q9H0C2 315 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 C5orf66Q9H5L9 145 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 DEPPQ9NTK1 212 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 ZNF319Q9P2F9 582 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 ARID1AO14497 2285 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 TRAV24A0A0B4J272 114 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 GAGE12HA6NDE8 117 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 TMEM235A6NFC5 223 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 C9JAW5 83 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 K7EM74 188 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 TOMM40O96008 361 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 P01737 135 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 RFPL3SP0C7P2 107 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 PIPP12273 146 aaPredicted RBP5.5□□□□□ -1.53
SMG1-217ENST00000569764 TMEM155Q4W5P6 130 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 RPL22L1Q6P5R6 122 aaKnown RBP5.5□□□□□ -1.53
SMG1-217ENST00000569764 OR2K2Q8NGT1 345 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 OR2H1Q9GZK4 316 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 TMEM126AQ9H061 195 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 HIGD1AQ9Y241 93 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 ICE1Q9Y2F5 2266 aa5.5□□□□□ -1.53
SMG1-217ENST00000569764 PHF3Q92576 2039 aaKnown RBP5.5□□□□□ -1.53
SMG1-217ENST00000569764 C7orf71A4D174 169 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 F5H697 171 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 TMUB2Q71RG4 321 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 KIR3DL3Q8N743 410 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 OR10G7Q8NGN6 311 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 RNF138Q8WVD3 245 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 RNF166Q96A37 237 aaPredicted RBP5.49□□□□□ -1.53
SMG1-217ENST00000569764 SPANXB1Q9NS25 103 aaPredicted RBP5.49□□□□□ -1.53
SMG1-217ENST00000569764 M0R135 149 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 ZIC3O60481 467 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 PPP1R3DO95685 299 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 NFYAP23511 347 aaPredicted RBP5.49□□□□□ -1.53
SMG1-217ENST00000569764 TNFSF8P32971 234 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 FOXG1P55316 489 aaPredicted RBP5.49□□□□□ -1.53
SMG1-217ENST00000569764 TIGITQ495A1 244 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 AWAT1Q58HT5 328 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 FAM27D1Q5T7N8 215 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 MDP1Q86V88 176 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 OR51E1Q8TCB6 317 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 ZNF799Q96GE5 643 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 DCTN5Q9BTE1 182 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 DOCK10Q96BY6 2186 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 FXYD6-FXYD2A0A087WZ82 144 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 LYRM1O43325 122 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 CRLF1O75462 422 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 GPANK1O95872 356 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 HPXP02790 462 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 MRPL3P09001 348 aaKnown RBP5.49□□□□□ -1.53
SMG1-217ENST00000569764 FABP5Q01469 135 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 HOGA1Q86XE5 327 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 DEFB108BQ8NET1 73 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 MDFIQ99750 246 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 FXYD6Q9H0Q3 95 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 SPANXA1Q9NS26 97 aa5.49□□□□□ -1.53
SMG1-217ENST00000569764 SOX21Q9Y651 276 aaPredicted RBP5.49□□□□□ -1.53
SMG1-217ENST00000569764 HBE1P02100 147 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 LRRC37A5PQ49AS3 106 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 UNQ5815/PRO19632Q6UWF5 114 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 TMEM86BQ8N661 226 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 CHST4Q8NCG5 386 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 OR1S1Q8NH92 325 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 OR5P3Q8WZ94 311 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 SSBP3Q9BWW4 388 aaPredicted RBP5.48□□□□□ -1.53
SMG1-217ENST00000569764 TMEM59Q9BXS4 323 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 CST11Q9H112 138 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 IGHV2OR16-5A0A0B4J2B6 119 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.48□□□□□ -1.53
SMG1-217ENST00000569764 DUS4LO95620 317 aaKnown RBP5.48□□□□□ -1.53
SMG1-217ENST00000569764 HOXB4P17483 251 aaPredicted RBP5.48□□□□□ -1.53
SMG1-217ENST00000569764 MEF2BQ02080 365 aaPredicted RBP5.48□□□□□ -1.53
SMG1-217ENST00000569764 TMEM69Q5SWH9 247 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 KCTD12Q96CX2 325 aaKnown RBP5.48□□□□□ -1.53
SMG1-217ENST00000569764 SEC11CQ9BY50 192 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 CHD3Q12873 2000 aaKnown RBP5.48□□□□□ -1.53
SMG1-217ENST00000569764 ZNF732B4DXR9 585 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 OXTP01178 125 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 APOA2P02652 100 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 OR5AC1P0C628 307 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 CD164Q04900 197 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 FAM19A1Q7Z5A9 133 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 PRR26Q8N8Z3 221 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 OR4C12Q96R67 309 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 HSD17B10Q99714 261 aaKnown RBP5.48□□□□□ -1.53
SMG1-217ENST00000569764 SELENOIQ9C0D9 397 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 NDUFB11Q9NX14 153 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 KLF12Q9Y4X4 402 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 FAM215AQ9Y5M1 114 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 CSAG2Q9Y5P2 127 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 IER3IP1Q9Y5U9 82 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 CDKN2AP42771 156 aaKnown RBP5.48□□□□□ -1.53
SMG1-217ENST00000569764 ZNF85Q03923 595 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 SFXN4Q6P4A7 337 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 TMEM91Q6ZNR0 172 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 LIAT1Q6ZQX7 453 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 OR5A2Q8NGI9 324 aa5.48□□□□□ -1.53
SMG1-217ENST00000569764 MIEN1Q9BRT3 115 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms