RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 LY6LH3BQJ8 138 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 OR2C1O95371 312 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 FBP1P09467 338 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 LINC00869P0C866 280 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 STAG3L2P0CL84 134 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 STAG3L3P0CL85 134 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 SAA1P0DJI8 122 aaPredicted RBP4.35□□□□□ -1.71
SF3B3-213ENST00000569687 RNASE2P10153 161 aaKnown RBP4.35□□□□□ -1.71
SF3B3-213ENST00000569687 GNLYP22749 145 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 CHRNA7P36544 502 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 UQCRFS1P47985 274 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 HOXA1P49639 335 aaPredicted RBP4.35□□□□□ -1.71
SF3B3-213ENST00000569687 FGF8P55075 233 aaPredicted RBP4.35□□□□□ -1.71
SF3B3-213ENST00000569687 ELLP55199 621 aaPredicted RBP4.35□□□□□ -1.71
SF3B3-213ENST00000569687 RPS16P62249 146 aaKnown RBP4.35□□□□□ -1.71
SF3B3-213ENST00000569687 RPL8P62917 257 aaKnown RBP4.35□□□□□ -1.71
SF3B3-213ENST00000569687 MEF2BQ02080 365 aaPredicted RBP4.35□□□□□ -1.71
SF3B3-213ENST00000569687 SSX2Q16385 188 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 TMEM241Q24JQ0 296 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 SMUG1Q53HV7 270 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 DTX2Q86UW9 622 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 TGIF2LXQ8IUE1 241 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 RNASEH2CQ8TDP1 164 aaKnown RBP4.35□□□□□ -1.71
SF3B3-213ENST00000569687 H1FXQ92522 213 aaKnown RBP4.35□□□□□ -1.71
SF3B3-213ENST00000569687 GGTLC1Q9BX51 225 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 COMMD5Q9GZQ3 224 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 MLXQ9UH92 298 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 PRELID1Q9Y255 219 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 PXMP4Q9Y6I8 212 aa4.35□□□□□ -1.71
SF3B3-213ENST00000569687 IGHV2-26A0A0B4J1V2 119 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 PPIAL4CA0A0B4J2A2 164 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 A0A1W2PPV4 95 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 ZFP92A6NM28 416 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 ZNF727A8MUV8 499 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 C1orf196B1AJZ1 125 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 LYNX1G3V0Z9 82 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 BUB1B-PAK6H3BSN5 160 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 M0R1W7 72 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 PDE6DO43924 150 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 CLN5O75503 358 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 TSPAN9O75954 239 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 VENTXO95231 258 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 CXorf1O96002 111 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 PPIAL4GP0DN37 164 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 LYNX1P0DP58 116 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 MYOD1P15172 320 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 RAB5AP20339 215 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 AKR1C3P42330 323 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 CDC34P49427 236 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-213ENST00000569687 COMPP49747 757 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-213ENST00000569687 RND2P52198 227 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 SUB1P53999 127 aaKnown RBP eCLIP4.34□□□□□ -1.71
SF3B3-213ENST00000569687 RHOBP62745 196 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 PAX2Q02962 417 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 CD69Q07108 199 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 HNF4GQ14541 408 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 MRGPRG-AS1Q2M3A8 158 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 HLA-DRB5Q30154 266 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 VMA21Q3ZAQ7 101 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 LCE2CQ5TA81 110 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 MIC13Q5XKP0 118 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 CYP2G1PQ6ZSU1 146 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 FAM24BQ8N5W8 94 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 OR11H6Q8NGC7 330 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 OR8B3Q8NGG8 313 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 NANPQ8TBE9 248 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 TIMD4Q96H15 378 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 SLC35E1Q96K37 410 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 HARBI1Q96MB7 349 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 BBC3Q96PG8 261 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-213ENST00000569687 OR8B2Q96RD0 313 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 SSX3Q99909 188 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 C20orf24Q9BUV8 137 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 CLEC7AQ9BXN2 247 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 TMPRSS5Q9H3S3 457 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 PATZ1Q9HBE1 687 aaKnown RBP4.34□□□□□ -1.71
SF3B3-213ENST00000569687 BIN3Q9NQY0 253 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 ZNRD1Q9P1U0 126 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 NAT8Q9UHE5 227 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 KLF2Q9Y5W3 355 aaPredicted RBP4.34□□□□□ -1.71
SF3B3-213ENST00000569687 ARL2-SNX15V9GYD0 113 aa4.34□□□□□ -1.71
SF3B3-213ENST00000569687 ADGRG4Q8IZF6 3080 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 PCNX1Q96RV3 2341 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 TANC2Q9HCD6 1990 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 CGB1A6NKQ9 187 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 F6UZH7 168 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 TGOLN2O43493 480 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 PAGE4O60829 102 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 LIPFP07098 398 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 CRYGCP07315 174 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 AREGP15514 252 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 PRTN3P24158 256 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 RAB5BP61020 215 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 B2MP61769 119 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 DIAPH2-AS1Q14236 149 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 GAMTQ14353 236 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 HABP2Q14520 560 aaPredicted RBP4.33□□□□□ -1.72
SF3B3-213ENST00000569687 PSG5Q15238 335 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 ELOBQ15370 118 aa4.33□□□□□ -1.72
SF3B3-213ENST00000569687 PRSS8Q16651 343 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms