RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ZNF880Q6PDB4 577 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 ZNF773Q6PK81 442 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 TMPRSS11AQ6ZMR5 421 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 AHSA2Q719I0 299 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 Q8N814 137 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 OR52I1Q8NGK6 324 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 APH1BQ8WW43 257 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 ST8SIA2Q92186 375 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 CYYR1Q96J86 154 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 C4orf36Q96KX1 117 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 S100A13Q99584 98 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 CHAC1Q9BUX1 264 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 OR51E2Q9H255 320 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 EXOGQ9Y2C4 368 aaKnown RBP4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 TPRKBQ9Y3C4 175 aa4.42□□□□□ -1.7
HERPUD1-217ENST00000569429 CBY3A6NI87 242 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 OR4C45A6NMZ5 311 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 MYL12BO14950 172 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 WBP4O75554 376 aaKnown RBP4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 CTSGP08311 255 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 DEFB130BP0DP73 79 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 DEFB130AP0DP74 79 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 NAT1P18440 290 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 GABRB1P18505 474 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 DCKP27707 260 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 ETV1P50549 477 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 ASAH1Q13510 395 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 ACOT6Q3I5F7 207 aaPredicted RBP4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 SVOPQ8N4V2 548 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 DCANP1Q8TF63 244 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 GNPNAT1Q96EK6 184 aaPredicted RBP4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 SDHAF2Q9NX18 166 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 ERVK13-1Q9NX77 482 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 PRR13Q9NZ81 148 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 OR1A1Q9P1Q5 309 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 GHRLQ9UBU3 117 aa4.41□□□□□ -1.7
HERPUD1-217ENST00000569429 PNMA8CA0A1B0GUJ8 204 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 SMIM31A0A1B0GVY4 71 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 CGB1A6NKQ9 187 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 H3BNG1 76 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 K7EP13 123 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 PDCD6O75340 191 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 KBTBD11O94819 623 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 APOHP02749 345 aaPredicted RBP4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 HSMCR30P0CW71 290 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 ZNF93P35789 620 aaPredicted RBP4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 SCAND1P57086 179 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 LCE2CQ5TA81 110 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 OR2G6Q5TZ20 316 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 C1orf158Q8N1D5 194 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 OR5AK2Q8NH90 309 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 TMEM167AQ8TBQ9 72 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 CIRBP-AS1Q8TBR5 109 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 FCGR1BQ92637 280 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 MRPS26Q9BYN8 205 aaKnown RBP4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 FGF20Q9NP95 211 aaPredicted RBP4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 PLCXD1Q9NUJ7 323 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 BABAM2Q9NXR7 383 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 C21orf62Q9NYP8 219 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 MSRB1Q9NZV6 116 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 CLEC2DQ9UHP7 191 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 PSORS1C1Q9UIG5 152 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 BLOC1S6Q9UL45 172 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 DIMT1Q9UNQ2 313 aaKnown RBP4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 GOLT1BQ9Y3E0 138 aa4.4□□□□□ -1.71
HERPUD1-217ENST00000569429 TRAV9-2A0A087WT02 112 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 TRAV26-1A0A087WT03 109 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 MARCH11A6NNE9 402 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 E9PI62 339 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 J3QRE1 110 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 CYB5BO43169 146 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 RGS10O43665 173 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 YIF1AO95070 293 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 NAPSAO96009 420 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 IGLV2-11P01706 119 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 CDK1P06493 297 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 HLA-DRB4P13762 266 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 IGFBP3P17936 291 aaPredicted RBP4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 M6PRP20645 277 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 CD300CQ08708 224 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 MRPL28Q13084 256 aaKnown RBP4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 ARFRP1Q13795 201 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 YIF1BQ5BJH7 314 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 PSMG4Q5JS54 123 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 RBM48Q5RL73 367 aaKnown RBP4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 RPL22L1Q6P5R6 122 aaKnown RBP4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 MOB1BQ7L9L4 216 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 SYS1Q8N2H4 156 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 ZFP41Q8N8Y5 198 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 STXBP6Q8NFX7 210 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 VSTM2AQ8TAG5 236 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 SCARB1Q8WTV0 552 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 C5orf30Q96GV9 206 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 ADTRPQ96IZ2 230 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 Q96M66 194 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 GINS3Q9BRX5 216 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 TMEM231Q9H6L2 316 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 DNAJC4Q9NNZ3 241 aa4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 MRPS18AQ9NVS2 196 aaKnown RBP4.39□□□□□ -1.71
HERPUD1-217ENST00000569429 CACNG5Q9UF02 275 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms