RNA–Protein interactions for RNA: ENST00000569066.2

UBR1-208, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 1 (best)

Gene UBR1, Length 2,250 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-208ENST00000569066 KCTD7Q96MP8 289 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 OR2A5Q96R48 311 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 RTBDNQ9BSG5 229 aaPredicted RBP3.67□□□□□ -1.82
UBR1-208ENST00000569066 VAMP8Q9BV40 100 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 PECRQ9BY49 303 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 SLC25A39Q9BZJ4 359 aaPredicted RBP3.67□□□□□ -1.82
UBR1-208ENST00000569066 TAS2R5Q9NYW4 299 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 UQCR10Q9UDW1 63 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 TRAPPC2LQ9UL33 140 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 MRPS16Q9Y3D3 137 aaKnown RBP3.67□□□□□ -1.82
UBR1-208ENST00000569066 LRP5O75197 1615 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 SIGLEC1Q9BZZ2 1709 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 NWD2Q9ULI1 1742 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 OR51F1A6NGY5 319 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 ZNF860A6NHJ4 632 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 E7EQ34 232 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 SLC31A1O15431 190 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 KLK1P06870 262 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 HIST1H1EP10412 219 aaKnown RBP3.67□□□□□ -1.82
UBR1-208ENST00000569066 TSPOP30536 169 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 NOVP48745 357 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 TCL1AP56279 114 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 SELENOWP63302 87 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 HIST1H3AP68431 136 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 H3F3AP84243 136 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 ZNF684Q5T5D7 378 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 ZFP2Q6ZN57 461 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 C20orf196Q8IYI0 205 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 UMODL1-AS1Q8N2C9 162 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 OSR2Q8N2R0 312 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 ZNF709Q8N972 641 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 ZFP3Q96NJ6 502 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 GABARAPL1Q9H0R8 117 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 LINC00597Q9H2U6 94 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 POPDC3Q9HBV1 291 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 MED29Q9NX70 200 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 HS3ST2Q9Y278 367 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 SIGLEC7Q9Y286 467 aa3.67□□□□□ -1.82
UBR1-208ENST00000569066 FOCADQ5VW36 1801 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 USP32Q8NFA0 1604 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 MED1Q15648 1581 aaPredicted RBP3.66□□□□□ -1.82
UBR1-208ENST00000569066 A0A087WWC5 75 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 FABP5P3A8MUU1 101 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 TYMSP04818 313 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 IL5P05113 134 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 GRPRP30550 384 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 CD70P32970 193 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 SNCAP37840 140 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 UBE2NP61088 152 aaKnown RBP3.66□□□□□ -1.82
UBR1-208ENST00000569066 HERVK_113P61574 105 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 OR8B8Q15620 311 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 LCE1EQ5T753 118 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 TMEM78Q5T7P6 136 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 TSPO2Q5TGU0 170 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 Q6ZR03 302 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 GTF2H5Q6ZYL4 71 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 CYB561D1Q8N8Q1 229 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 OR13G1Q8NGZ3 307 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 MFSD8Q8NHS3 518 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 FLYWCH2Q96CP2 140 aaKnown RBP3.66□□□□□ -1.82
UBR1-208ENST00000569066 PEBP4Q96S96 227 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 TIMM17AQ99595 171 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 OR52D1Q9H346 318 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 MFSD1Q9H3U5 465 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 DNAJC27Q9NZQ0 273 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 CICQ96RK0 1608 aaPredicted RBP3.66□□□□□ -1.82
UBR1-208ENST00000569066 CABIN1Q9Y6J0 2220 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 CD163L1Q9NR16 1453 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 DIP2CQ9Y2E4 1556 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 SETBP1Q9Y6X0 1596 aa3.66□□□□□ -1.82
UBR1-208ENST00000569066 A0A0J9YXV3 536 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 CENPVL3A0A0U1RRI6 287 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 MAP1LC3B2A6NCE7 125 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 CCDC179H3BU77 68 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 M0R129 80 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 PROSCO94903 275 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 UBL3O95164 117 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 RHOCP08134 193 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 CYBAP13498 195 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 RPL7P18124 248 aaKnown RBP3.65□□□□□ -1.82
UBR1-208ENST00000569066 FOXF1Q12946 379 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 DEFB116Q30KQ4 102 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 FAM162BQ5T6X4 162 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 CALHM3Q86XJ0 350 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 OR52R1Q8NGF1 315 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 OR5A2Q8NGI9 324 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 PIFOQ8TCI5 191 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 RXFP2Q8WXD0 754 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 FAM104AQ969W3 186 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 BTF3L4Q96K17 158 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 TSPAN32Q96QS1 320 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 GABRG3Q99928 467 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 ANAPC13Q9BS18 74 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 MAP1LC3BQ9GZQ8 125 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 CYTL1Q9NRR1 136 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 TMEM106BQ9NUM4 274 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 ZNF443Q9Y2A4 671 aaPredicted RBP3.65□□□□□ -1.82
UBR1-208ENST00000569066 MON2Q7Z3U7 1717 aa3.65□□□□□ -1.82
UBR1-208ENST00000569066 NINQ8N4C6 2090 aa3.65□□□□□ -1.83
UBR1-208ENST00000569066 A0A087WUU8 490 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms