RNA–Protein interactions for RNA: ENST00000568499.1

KLHDC4-223, Transcript of kelch domain containing 4, human

TSL 3

Gene KLHDC4, Length 445 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KLHDC4-223	ENST00000568499	INS-IGF2	F8WCM5	200 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	SOX15	O60248	233 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	PITX3	O75364	302 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	REG1A	P05451	166 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	WT1-AS	Q06250	92 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	SPINK9	Q5DT21	86 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	NOXA1	Q86UR1	476 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	FAM223A	Q8IWN6	122 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	OR2C3	Q8N628	320 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	USMG5	Q96IX5	58 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	CIB3	Q96Q77	187 aa	Predicted RBP	11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	CITED2	Q99967	270 aa	Predicted RBP	11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	ALG5	Q9Y673	324 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	TNC	P24821	2201 aa		11.64	□□□□□ -0.55
KLHDC4-223	ENST00000568499	PLXNB1	O43157	2135 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	NUDT19	A8MXV4	375 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	NXPH3	O95157	252 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	RPLP1	P05386	114 aa	Known RBP	11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	HTR2B	P41595	481 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	NKX2-1	P43699	371 aa	Predicted RBP	11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	KRTAP10-3	P60369	221 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	RPP30	P78346	268 aa	Known RBP	11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	CYCS	P99999	105 aa	Known RBP	11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	SLC25A24	Q6NUK1	477 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	NECAP1	Q8NC96	275 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	OR1P1	Q8NH06	330 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	DTD1	Q8TEA8	209 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	UBE2E2	Q96LR5	201 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	C2orf50	Q96LR7	162 aa		11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	F11R	Q9Y624	299 aa	Known RBP	11.63	□□□□□ -0.55
KLHDC4-223	ENST00000568499	CCS	O14618	274 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	GOSR2	O14653	212 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	SCGB1D2	O95969	90 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	CDX1	P47902	265 aa	Predicted RBP	11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	ATP5I	P56385	69 aa	Predicted RBP	11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	RPL23A	P62750	156 aa	Known RBP	11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	RHOG	P84095	191 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	ATP5G2	Q06055	141 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	SRSF4	Q08170	494 aa	Known RBP	11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	NSUN5P1	Q3KNT7	163 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	TCTEX1D4	Q5JR98	221 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	FAM209B	Q5JX69	171 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	ZNF114	Q8NC26	417 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	OR10C1	Q96KK4	312 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	MED28	Q9H204	178 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	KLK15	Q9H2R5	256 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	RBKS	Q9H477	322 aa		11.62	□□□□□ -0.55
KLHDC4-223	ENST00000568499	MPTX1	A8MV57	137 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499		M0QZ24	198 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	CORT	O00230	105 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	SYNGR2	O43760	224 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	PRH1	P02810	166 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	ID3	Q02535	119 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	C2orf68	Q2NKX9	166 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	LCNL1	Q6ZST4	164 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	ZNF491	Q8N8L2	437 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	OR4D5	Q8NGN0	318 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	CXorf58	Q96LI9	332 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	P2RX4	Q99571	388 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	FBXL7	Q9UJT9	491 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499		U3KQ87	197 aa		11.61	□□□□□ -0.55
KLHDC4-223	ENST00000568499	TRBV9	A0A0B4J1U6	114 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499		A0A1W2PRX2	142 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	OR2J3	O76001	311 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	IFNA10	P01566	189 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	KLHL30-AS1	Q8NEE0	82 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	SLC24A4	Q8NFF2	622 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	OR4F17	Q8NGA8	305 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	MYOZ3	Q8TDC0	251 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	C4orf3	Q8WVX3	66 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	OR4F4	Q96R69	305 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	MAGT1	Q9H0U3	335 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	MGAT4C	Q9UBM8	478 aa		11.6	□□□□□ -0.55
KLHDC4-223	ENST00000568499	IGLV11-55	A0A075B6I3	123 aa		11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	PVALB	P20472	110 aa	Predicted RBP	11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	RAB11A	P62491	216 aa		11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	EXOSC2	Q13868	293 aa	Known RBP	11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	KLK9	Q2XQG4	91 aa		11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	C15orf32	Q32M92	178 aa		11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	EEF1AKMT3	Q96AZ1	226 aa		11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	MISP3	Q96FF7	219 aa		11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	FANCD2OS	Q96PS1	177 aa		11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	RAB40C	Q96S21	281 aa		11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	NMES1	Q9C002	83 aa		11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499	KLK9	Q9UKQ9	250 aa		11.59	□□□□□ -0.55
KLHDC4-223	ENST00000568499		L7N2F9	121 aa		11.58	□□□□□ -0.56
KLHDC4-223	ENST00000568499	SSSCA1	O60232	199 aa		11.58	□□□□□ -0.56
KLHDC4-223	ENST00000568499	RLN2	P04090	185 aa		11.58	□□□□□ -0.56
KLHDC4-223	ENST00000568499	IAPP	P10997	89 aa		11.58	□□□□□ -0.56
KLHDC4-223	ENST00000568499	NPY1R	P25929	384 aa		11.58	□□□□□ -0.56
KLHDC4-223	ENST00000568499	POLR2G	P62487	172 aa	Known RBP eCLIP	11.58	□□□□□ -0.56
KLHDC4-223	ENST00000568499	VAMP2	P63027	116 aa		11.58	□□□□□ -0.56
KLHDC4-223	ENST00000568499	C2orf83	Q53S99	150 aa		11.58	□□□□□ -0.56
KLHDC4-223	ENST00000568499	VN1R17P	Q8TDU5	208 aa		11.58	□□□□□ -0.56
KLHDC4-223	ENST00000568499	DPF1	Q92782	380 aa		11.58	□□□□□ -0.56
KLHDC4-223	ENST00000568499	TRBV7-1	A0A0A6YYK4	115 aa		11.57	□□□□□ -0.56
KLHDC4-223	ENST00000568499	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.57	□□□□□ -0.56
KLHDC4-223	ENST00000568499	NDUFB8	O95169	186 aa		11.57	□□□□□ -0.56
KLHDC4-223	ENST00000568499	SIX6	O95475	246 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 61 ms