RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 DEFA4P12838 97 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 RPL27AP46776 148 aaKnown RBP5.67□□□□□ -1.5
SMG1-215ENST00000568239 CCL20P78556 96 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 WT1-ASQ06250 92 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 PRSS8Q16651 343 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 MLANAQ16655 118 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 GUK1Q16774 197 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 CCDC144NLQ6NUI1 221 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 UQCC3Q6UW78 93 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 DYNAPQ8N1N2 210 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 TEX45Q8NA69 505 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 SSMEM1Q8WWF3 244 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 TBX15Q96SF7 602 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 NPVFQ9HCQ7 196 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 KIAA1456Q9P272 454 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 TMEM218A2RU14 115 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 FCN1O00602 326 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 SNRNP70P08621 437 aaKnown RBP5.67□□□□□ -1.5
SMG1-215ENST00000568239 PPT1P50897 306 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 CEBPGP53567 150 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 KRTAP10-9P60411 292 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 HAGHQ16775 308 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 CLEC12BQ2HXU8 276 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 ARSJQ5FYB0 599 aaPredicted RBP5.67□□□□□ -1.5
SMG1-215ENST00000568239 ACSM6Q6P461 480 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.67□□□□□ -1.5
SMG1-215ENST00000568239 SLC25A22Q9H936 323 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 UNKLQ9H9P5 680 aaKnown RBP5.67□□□□□ -1.5
SMG1-215ENST00000568239 CCDC168Q8NDH2 2452 aa5.67□□□□□ -1.5
SMG1-215ENST00000568239 CGB1A6NKQ9 187 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 MOSP00540 346 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 RNASE2P10153 161 aaKnown RBP5.66□□□□□ -1.5
SMG1-215ENST00000568239 SAA4P35542 130 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 OPRK1P41145 380 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 UBE2E1P51965 193 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 DLK1P80370 383 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 VWC2Q2TAL6 325 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 TMEM41BQ5BJD5 291 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 FAM122CQ6P4D5 195 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 TEPPQ6URK8 271 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 OR10G4Q8NGN3 311 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 OR10G9Q8NGN4 311 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 OR10G7Q8NGN6 311 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 LYPD6BQ8NI32 183 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 ABHD5Q8WTS1 349 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 RCC1LQ96I51 464 aaKnown RBP5.66□□□□□ -1.5
SMG1-215ENST00000568239 EAF1Q96JC9 268 aaPredicted RBP5.66□□□□□ -1.5
SMG1-215ENST00000568239 PBDC1Q9BVG4 233 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 PARD6GQ9BYG4 376 aaPredicted RBP5.66□□□□□ -1.5
SMG1-215ENST00000568239 SLC39A9Q9NUM3 307 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 WDR83OSQ9Y284 106 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 A0A1B0GW64 132 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 PRSS46E5RG02 174 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 NBR2O15453 112 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 AREGP15514 252 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 SUB1P53999 127 aaKnown RBP eCLIP5.66□□□□□ -1.5
SMG1-215ENST00000568239 C2orf83Q53S99 150 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 GCSAMLQ5JQS6 135 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 MIC13Q5XKP0 118 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 C19orf35Q6ZS72 473 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 RPP25LQ8N5L8 163 aaKnown RBP5.66□□□□□ -1.5
SMG1-215ENST00000568239 MAPK1IP1LQ8NDC0 245 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 OR2T10Q8NGZ9 312 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 CFHR4Q92496 578 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 MISP3Q96FF7 219 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 ACY3Q96HD9 319 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 RARRES2Q99969 163 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 FAM103A1Q9BTL3 118 aaKnown RBP5.66□□□□□ -1.5
SMG1-215ENST00000568239 GGACTQ9BVM4 153 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 GNG13Q9P2W3 67 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 TIMM9Q9Y5J7 89 aa5.66□□□□□ -1.5
SMG1-215ENST00000568239 KMT2BQ9UMN6 2715 aaPredicted RBP5.66□□□□□ -1.5
SMG1-215ENST00000568239 CREBBPQ92793 2442 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 ZFP92A6NM28 416 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 VWC2LB2RUY7 222 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 C9JQL5 133 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 HBE1P02100 147 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 SFTA3P0C7M3 94 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 TMEM11P17152 192 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 RAB31Q13636 194 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 PEA15Q15121 130 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 ZNF726P1Q15940 193 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 MRGPRG-AS1Q2M3A8 158 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 FBLN7Q53RD9 439 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 MINOS1Q5TGZ0 78 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 RUSC1-AS1Q66K80 236 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 SPSB3Q6PJ21 355 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 DPPA3Q6W0C5 159 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 BRD3OSQ6XYD6 125 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 SSX7Q7RTT5 188 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 LFNGQ8NES3 379 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 SRSF12Q8WXF0 261 aaKnown RBP5.65□□□□□ -1.5
SMG1-215ENST00000568239 P2RX4Q99571 388 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 MGST2Q99735 147 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 MINOS1-NBL1R4GNA1 71 aa5.65□□□□□ -1.5
SMG1-215ENST00000568239 IGHV3-21A0A0B4J1V1 117 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 TRAV40A0A0B4J280 105 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 CENPVL3A0A0U1RRI6 287 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 MAP1LC3B2A6NCE7 125 aa5.65□□□□□ -1.51
SMG1-215ENST00000568239 MPDU1O75352 247 aa5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms