RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 EIF4EBP3O60516 100 aaPredicted RBP3.61□□□□□ -1.83
CLK3-219ENST00000567805 IFNA6P05013 189 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 OR13C7P0DN81 318 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 EDN2P20800 178 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 GPR183P32249 361 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 ALDH3B2P48448 385 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 ELLP55199 621 aaPredicted RBP3.61□□□□□ -1.83
CLK3-219ENST00000567805 CD81P60033 236 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 RND3P61587 244 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 HAGHQ16775 308 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 RNASE10Q5GAN6 216 aaKnown RBP3.61□□□□□ -1.83
CLK3-219ENST00000567805 ZNF57Q68EA5 555 aaPredicted RBP3.61□□□□□ -1.83
CLK3-219ENST00000567805 SLC25A24Q6NUK1 477 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 SPSB3Q6PJ21 355 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 PLET1Q6UQ28 207 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 GPR141Q7Z602 305 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 LHFPL1Q86WI0 220 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 ARRDC1Q8N5I2 433 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 OR1L6Q8NGR2 347 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 OR4A16Q8NH70 328 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 MUC7Q8TAX7 377 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 ZNF502Q8TBZ5 544 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 MARC2Q969Z3 335 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 BSCL2Q96G97 398 aaPredicted RBP3.61□□□□□ -1.83
CLK3-219ENST00000567805 ZNF486Q96H40 463 aaPredicted RBP3.61□□□□□ -1.83
CLK3-219ENST00000567805 SEC22AQ96IW7 307 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 ABHD1Q96SE0 405 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 ATP6V0BQ99437 205 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 NEURL2Q9BR09 285 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 SPATA25Q9BR10 227 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 HINT2Q9BX68 163 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 ZNF436Q9C0F3 470 aaPredicted RBP3.61□□□□□ -1.83
CLK3-219ENST00000567805 NAA50Q9GZZ1 169 aaKnown RBP3.61□□□□□ -1.83
CLK3-219ENST00000567805 PLEKHA3Q9HB20 300 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 TMEM14BQ9NUH8 114 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 EXTL2Q9UBQ6 330 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 KLK11Q9UBX7 282 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 MTFP1Q9UDX5 166 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 NSG2Q9Y328 171 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 UFC1Q9Y3C8 167 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 F11RQ9Y624 299 aaKnown RBP3.61□□□□□ -1.83
CLK3-219ENST00000567805 S4R3C0 116 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 STAB2Q8WWQ8 2551 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 DYNC2H1Q8NCM8 4307 aaKnown RBP3.61□□□□□ -1.83
CLK3-219ENST00000567805 STARD9Q9P2P6 4700 aa3.61□□□□□ -1.83
CLK3-219ENST00000567805 TRAV25A0A0B4J276 109 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 OR2T8A6NH00 312 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 DBX1A6NMT0 343 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 OR11H12B2RN74 326 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 GABARAPH6UMI1 98 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 M0QYG6 137 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 RGS5O15539 181 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 PAX4O43316 350 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 TGOLN2O43493 480 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 IGKV1-39P01597 117 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 CD3DP04234 171 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 IGKV1D-39P04432 117 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 CD7P09564 240 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 C8orf88P0DMB2 117 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 LYL1P12980 280 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 PGAM2P15259 253 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 MFAP2P55001 183 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 PIGPP57054 158 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 TAS2R19P59542 299 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 MRPS10P82664 201 aaKnown RBP3.6□□□□□ -1.83
CLK3-219ENST00000567805 PRCDQ00LT1 54 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 SSBP1Q04837 148 aaKnown RBP3.6□□□□□ -1.83
CLK3-219ENST00000567805 GUCA2BQ16661 112 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 ANKRD55Q3KP44 614 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 RNASE12Q5GAN4 147 aaKnown RBP3.6□□□□□ -1.83
CLK3-219ENST00000567805 CASC10Q5T4H9 136 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 UNQ9165/PRO28630Q6UXU0 137 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 LINC00322Q6ZN03 302 aaPredicted RBP3.6□□□□□ -1.83
CLK3-219ENST00000567805 SLC16A13Q7RTY0 426 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 H2BFWTQ7Z2G1 175 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 TMEM61Q8N0U2 210 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 TMEM229BQ8NBD8 167 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 UXS1Q8NBZ7 420 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 ZNF114Q8NC26 417 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 OR1P1Q8NH06 330 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 OR52I2Q8NH67 350 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 ZFAND1Q8TCF1 268 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 SCARB1Q8WTV0 552 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 RAB2BQ8WUD1 216 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 CACNG8Q8WXS5 425 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 TMEM190Q8WZ59 177 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 MRGPRFQ96AM1 343 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 ISOC1Q96CN7 298 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 BCL7BQ9BQE9 202 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 DAZ1Q9NQZ3 744 aaKnown RBP3.6□□□□□ -1.83
CLK3-219ENST00000567805 GAR1Q9NY12 217 aaKnown RBP3.6□□□□□ -1.83
CLK3-219ENST00000567805 C21orf62Q9NYP8 219 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 MRPL27Q9P0M9 148 aaKnown RBP3.6□□□□□ -1.83
CLK3-219ENST00000567805 RABL2AQ9UBK7 228 aaPredicted RBP3.6□□□□□ -1.83
CLK3-219ENST00000567805 MLXQ9UH92 298 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 RABL2BQ9UNT1 228 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 CEPT1Q9Y6K0 416 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 RYR3Q15413 4870 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 SACSQ9NZJ4 4579 aa3.6□□□□□ -1.83
CLK3-219ENST00000567805 IGHV3-35A0A0C4DH35 117 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 94.6 ms