RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	FAM106A	Q4KMX7	169 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	LCN12	Q6JVE5	192 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	C19orf35	Q6ZS72	473 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	GPHB5	Q86YW7	130 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635		Q8N402	240 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR2K2	Q8NGT1	345 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	ZFAND1	Q8TCF1	268 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	EEF1AKMT3	Q96AZ1	226 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	THAP7	Q9BT49	309 aa	Predicted RBP	5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	TMEM140	Q9NV12	185 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	DMRT1	Q9Y5R6	373 aa		5.26	□□□□□ -1.57
SF3B3-209	ENST00000567635	NBEAL2	Q6ZNJ1	2754 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	IGLV11-55	A0A075B6I3	123 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	IGLC7	A0M8Q6	106 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	LINC00862	A6NCI5	91 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	IZUMO1R	A6ND01	250 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	MARCH11	A6NNE9	402 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635		A8MZ25	164 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	LGALS9	O00182	355 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	PLA2G10	O15496	165 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	CYB5B	O43169	146 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	GSTZ1	O43708	216 aa	Predicted RBP	5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	KRAS	P01116	189 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	IGHV3-23	P01764	117 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	HLA-A	P01891	365 aa	Known RBP	5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	IFNA6	P05013	189 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	CLEC3B	P05452	202 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	SERPINE2	P07093	398 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	IGHV4-30-4	P0DP06	118 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	G6PC	P35575	357 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	ARL3	P36405	182 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	UCP3	P55916	312 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	MRPS10	P82664	201 aa	Known RBP	5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	ASAH1	Q13510	395 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	ZNF585B	Q52M93	769 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	PHLDA2	Q53GA4	152 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	TOR2A	Q5JU69	321 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	PXDC1	Q5TGL8	231 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	CLEC19A	Q6UXS0	136 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	HSD17B13	Q7Z5P4	300 aa	Predicted RBP	5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	GTSCR1	Q86UQ5	136 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	SGPP2	Q8IWX5	399 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	LINC00518	Q8N0U6	118 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR10W1	Q8NGF6	305 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR1L8	Q8NGR8	309 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	FCAMR	Q8WWV6	532 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	CXorf58	Q96LI9	332 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	QTRT1	Q9BXR0	403 aa	Known RBP	5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	FAM212B	Q9NTI7	297 aa	Predicted RBP	5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	C19orf73	Q9NVV2	129 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	FKBP11	Q9NYL4	201 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	THYN1	Q9P016	225 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	KLK11	Q9UBX7	282 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	TBC1D24	Q9ULP9	559 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635		S4R3C0	116 aa		5.25	□□□□□ -1.57
SF3B3-209	ENST00000567635	ZNF320	A2RRD8	509 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	C2orf70	A6NJV1	201 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	ZNF785	A8K8V0	405 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	GABARAP	H6UMI1	98 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635		M0QYG6	137 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR13C7	P0DN81	318 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	FOLR2	P14207	255 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	CBLN1	P23435	193 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	DEFB114	Q30KQ6	69 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	CD300E	Q496F6	205 aa	Predicted RBP	5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	TRIQK	Q629K1	86 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	SLC25A24	Q6NUK1	477 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	MZT2B	Q6NZ67	158 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	ADAMTSL5	Q6ZMM2	481 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	H2BFWT	Q7Z2G1	175 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	TBC1D26	Q86UD7	250 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	TCTE3	Q8IZS6	198 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	DUSP18	Q8NEJ0	188 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR52I2	Q8NH67	350 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	VN1R17P	Q8TDU5	208 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	DYNLRB2	Q8TF09	96 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	ST6GAL2	Q96JF0	529 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	CCDC140	Q96MF4	163 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	RCHY1	Q96PM5	261 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	HINT2	Q9BX68	163 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	FXYD6	Q9H0Q3	95 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	TUBA4B	Q9H853	241 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	ZMAT4	Q9H898	229 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	NDUFA4L2	Q9NRX3	87 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	TECR	Q9NZ01	308 aa	Known RBP	5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	MTFP1	Q9UDX5	166 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	PRND	Q9UKY0	176 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	NSG2	Q9Y328	171 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	OR51B2	Q9Y5P1	312 aa		5.24	□□□□□ -1.57
SF3B3-209	ENST00000567635	MFSD2B	A6NFX1	497 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	PCP4L1	A6NKN8	68 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	CD3D	P04234	171 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	PGAM2	P15259	253 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	TBP	P20226	339 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	INPP1	P49441	399 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	WT1-AS	Q06250	92 aa		5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	RNASE12	Q5GAN4	147 aa	Known RBP	5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	RNASE10	Q5GAN6	216 aa	Known RBP	5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	ZNF57	Q68EA5	555 aa	Predicted RBP	5.23	□□□□□ -1.57
SF3B3-209	ENST00000567635	PLET1	Q6UQ28	207 aa		5.23	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms