RNA–Protein interactions for RNA: ENST00000567250.5

SF3B3-208, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 1,084 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-208ENST00000567250 MYCNOSP40205 109 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 SPCS3P61009 180 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 RHOGP84095 191 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 WT1-ASQ06250 92 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 IZUMO4Q1ZYL8 232 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 ANKRD55Q3KP44 614 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 LYZL2Q7Z4W2 148 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 OR10W1Q8NGF6 305 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 OR1S1Q8NH92 325 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 GPR146Q96CH1 333 aa9.46□□□□□ -0.9
SF3B3-208ENST00000567250 F11RQ9Y624 299 aaKnown RBP9.46□□□□□ -0.9
SF3B3-208ENST00000567250 PKD1L1Q8TDX9 2849 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 TRBV9A0A0B4J1U6 114 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 INS-IGF2F8WCM5 200 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 I3L521 148 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 PRAF2O60831 178 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 PRH1P02810 166 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 OR8U8P0C7N1 319 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 SNCAP37840 140 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 PDLIM3Q53GG5 364 aaPredicted RBP9.45□□□□□ -0.9
SF3B3-208ENST00000567250 C4orf48Q5BLP8 95 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 NRARPQ7Z6K4 114 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 ZNF114Q8NC26 417 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 DUSP18Q8NEJ0 188 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 OR1P1Q8NH06 330 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 MITD1Q8WV92 249 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 CXorf58Q96LI9 332 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 GNB4Q9HAV0 340 aa9.45□□□□□ -0.9
SF3B3-208ENST00000567250 GPN1Q9HCN4 374 aaPredicted RBP9.45□□□□□ -0.9
SF3B3-208ENST00000567250 IGLV11-55A0A075B6I3 123 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 CEBPZOSA8MTT3 80 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 FAM90A26D6RGX4 464 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 CCL24O00175 119 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 CORTO00230 105 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 OR2J3O76001 311 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 PTTG1O95997 202 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 IGHV3-11P01762 117 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 HOXB5P09067 269 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 SUB1P53999 127 aaKnown RBP eCLIP9.44□□□□□ -0.96e-8■□□□□ 9.8
SF3B3-208ENST00000567250 ATP5G2Q06055 141 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 ZNF616Q08AN1 781 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 EXOSC2Q13868 293 aaKnown RBP9.44□□□□□ -0.9
SF3B3-208ENST00000567250 KIAA0141Q14154 515 aaPredicted RBP9.44□□□□□ -0.9
SF3B3-208ENST00000567250 KLK9Q2XQG4 91 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 DEFB136Q30KP8 78 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 C15orf32Q32M92 178 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 Q6ZRM9 215 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 C18orf65Q6ZTR6 163 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 OR2C3Q8N628 320 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 OR11H1Q8NG94 326 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 ZNF431Q8TF32 576 aaPredicted RBP9.44□□□□□ -0.9
SF3B3-208ENST00000567250 DPF1Q92782 380 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 OR5B12Q96R08 314 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 HIPK2Q9H2X6 1198 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 RANGRFQ9HD47 186 aaPredicted RBP9.44□□□□□ -0.9
SF3B3-208ENST00000567250 FBXL7Q9UJT9 491 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 KLK9Q9UKQ9 250 aa9.44□□□□□ -0.9
SF3B3-208ENST00000567250 LINC01619G3V211 115 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 IL5P05113 134 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 CD33P20138 364 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 TNFRSF9Q07011 255 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 FHL3Q13643 280 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 SPINK9Q5DT21 86 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 GGNBP1Q5YKI7 109 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 ZNF343Q6P1L6 599 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 OR52B4Q8NGK2 314 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 EEF1AKMT3Q96AZ1 226 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 RAX2Q96IS3 184 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 FANCD2OSQ96PS1 177 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 P2RX4Q99571 388 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 HSPB7Q9UBY9 170 aa9.43□□□□□ -0.9
SF3B3-208ENST00000567250 TRBV7-1A0A0A6YYK4 115 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 INMT-MINDY4F8WBC2 141 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 MED6O75586 246 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 LY86O95711 162 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 HSPB1P04792 205 aaKnown RBP9.42□□□□□ -0.9
SF3B3-208ENST00000567250 ZP3P21754 424 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 HTR2BP41595 481 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 DEFA5Q01523 94 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 DCTN2Q13561 401 aaKnown RBP9.42□□□□□ -0.9
SF3B3-208ENST00000567250 SLC25A24Q6NUK1 477 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 ETV3LQ6ZN32 361 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 C19orf35Q6ZS72 473 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 NOXA1Q86UR1 476 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 OR1N2Q8NGR9 330 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 SEC22CQ9BRL7 303 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 MARVELD1Q9BSK0 173 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 MCRIP2Q9BUT9 160 aaKnown RBP9.42□□□□□ -0.9
SF3B3-208ENST00000567250 GPR61Q9BZJ8 451 aa9.42□□□□□ -0.9
SF3B3-208ENST00000567250 HEYLQ9NQ87 328 aaPredicted RBP9.42□□□□□ -0.9
SF3B3-208ENST00000567250 PEF1Q9UBV8 284 aaKnown RBP9.42□□□□□ -0.9
SF3B3-208ENST00000567250 IGHV4OR15-8A0A075B7B6 117 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 A0A087WW49 117 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 SNRPGP15A8MWD9 76 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 ADAP1O75689 374 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 NXPH3O95157 252 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 C12orf45Q8N5I9 185 aaPredicted RBP9.41□□□□□ -0.9
SF3B3-208ENST00000567250 LINC00482Q8N8I6 264 aa9.41□□□□□ -0.9
SF3B3-208ENST00000567250 SLC24A4Q8NFF2 622 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms