RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 SERTAD4Q9NUC0 356 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 TMEM106BQ9NUM4 274 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 TP53TG3Q9ULZ0 132 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 SLC45A2Q9UMX9 530 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 A0A1B0GWJ7 208 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 LHBP01229 141 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 MGST1P10620 155 aaKnown RBP11.66□□□□□ -0.54
CDH1-209ENST00000566510 LGALS4P56470 323 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 SUMO1P63165 101 aaKnown RBP11.66□□□□□ -0.54
CDH1-209ENST00000566510 TDRG1Q3Y452 100 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 NEUROG1Q92886 237 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 RAB9BQ9NP90 201 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 IL19Q9UHD0 177 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 NAT8BQ9UHF3 227 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 PRNDQ9UKY0 176 aa11.66□□□□□ -0.54
CDH1-209ENST00000566510 IGKV1OR2-108A0A075B7D4 117 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 SRRM4A7MD48 611 aaKnown RBP11.65□□□□□ -0.54
CDH1-209ENST00000566510 C9JCJ5 164 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 CGB3P0DN86 165 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 CGB7P0DN87 165 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 TNFAIP6P98066 277 aaPredicted RBP11.65□□□□□ -0.54
CDH1-209ENST00000566510 KIAA1644Q3SXP7 199 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 SEM1Q6ZVN7 128 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 RPRMLQ8N4K4 120 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 VN1R17PQ8TDU5 208 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 PARD6AQ9NPB6 346 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 SLC35D1Q9NTN3 355 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 RNF7Q9UBF6 113 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 M0R143 59 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 G0S2P27469 103 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 GLRXP35754 106 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 NUTF2P61970 127 aaKnown RBP11.65□□□□□ -0.54
CDH1-209ENST00000566510 ST6GALNAC3Q8NDV1 305 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 OR10W1Q8NGF6 305 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 C11orf52Q96A22 123 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 ADTRPQ96IZ2 230 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 TMEM167BQ9NRX6 74 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 TECRQ9NZ01 308 aaKnown RBP11.65□□□□□ -0.54
CDH1-209ENST00000566510 PAM16Q9Y3D7 125 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 V9GYV3 84 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 DYSFO75923 2080 aa11.65□□□□□ -0.54
CDH1-209ENST00000566510 PCNX1Q96RV3 2341 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 SPAARA0A1B0GVQ0 90 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 CDKN1AP38936 164 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 SELENOVP59797 346 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 SELENOTP62341 195 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 RANP62826 216 aaKnown RBP11.64□□□□□ -0.55
CDH1-209ENST00000566510 PAFAH1B2P68402 229 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 RTL8BQ17RB0 113 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 TIGITQ495A1 244 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 ZNF474Q6S9Z5 364 aaPredicted RBP11.64□□□□□ -0.55
CDH1-209ENST00000566510 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.64□□□□□ -0.55
CDH1-209ENST00000566510 OR5AU1Q8NGC0 362 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 OR9G1Q8NH87 305 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 CHODLQ9H9P2 273 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 AREGP15514 252 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 LINC00310P59036 64 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 ASPHD1Q5U4P2 390 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 NHLRC2Q8NBF2 726 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 DEFB124Q8NES8 71 aa11.64□□□□□ -0.55
CDH1-209ENST00000566510 TEX50A0A1B0GTY4 177 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 CT45A6P0DMU7 189 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 CT45A5P0DMU8 189 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 CT45A7P0DMV0 189 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 PRCDQ00LT1 54 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 DCAF16Q9NXF7 216 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 PLXNB1O43157 2135 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 NAV3Q8IVL0 2385 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 TRAV9-1A0A075B6T8 112 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 UPK2O00526 184 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 TIMM23BQ5SRD1 257 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 PKDREJQ9NTG1 2253 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 ITGB1BP1O14713 200 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 MRPL54Q6P161 138 aaKnown RBP11.63□□□□□ -0.55
CDH1-209ENST00000566510 SIGLECL1Q8N7X8 197 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 GAFA1Q96PS6 74 aa11.63□□□□□ -0.55
CDH1-209ENST00000566510 TTC28Q96AY4 2481 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 KIR2DL5BA0A0G2JN68 375 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 KIR2DL5BA0A0G2JPC4 375 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 GGTLC3B5MD39 225 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 IGHV3-48P01763 117 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 SAA1P0DJI8 122 aaPredicted RBP11.62□□□□□ -0.55
CDH1-209ENST00000566510 REG1BP48304 166 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 TAS2R45P59539 299 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 KRTDAPP60985 99 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 IGFL2Q6UWQ7 119 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 KIR2DL5AQ8N109 375 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 ZNF503Q96F45 646 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 SLC25A10Q9UBX3 287 aaPredicted RBP11.62□□□□□ -0.55
CDH1-209ENST00000566510 LY96Q9Y6Y9 160 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 GVINP1Q7Z2Y8 2422 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 DMXL2Q8TDJ6 3036 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 TRAV5A0A0B4J249 113 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 IGHV1-46P01743 117 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 IRF2P14316 349 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 CCL8P80075 99 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 RPL19P84098 196 aaKnown RBP11.62□□□□□ -0.55
CDH1-209ENST00000566510 STUMQ69YW2 141 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 FAM169BQ8N8A8 192 aa11.62□□□□□ -0.55
CDH1-209ENST00000566510 ZNF439Q8NDP4 499 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms