RNA–Protein interactions for RNA: ENST00000566376.3

TCF4-233, Transcript of transcription factor 4, human

TSL 5

Gene TCF4, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF4-233	ENST00000566376	CNIH1	O95406	144 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	APOA1	P02647	267 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	CD7	P09564	240 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	HLA-G	P17693	338 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	TAS2R31	P59538	309 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	ARPC4	P59998	168 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	RPL8	P62917	257 aa	Known RBP	4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	IZUMO4	Q1ZYL8	232 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	RNASE12	Q5GAN4	147 aa	Known RBP	4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	TMEM69	Q5SWH9	247 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	ANKRD13B	Q86YJ7	626 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	FAM223A	Q8IWN6	122 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	LAX1	Q8IWV1	398 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	OR6Q1	Q8NGQ2	317 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	ZNF502	Q8TBZ5	544 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	TMEM68	Q96MH6	324 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	RCHY1	Q96PM5	261 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	ABHD1	Q96SE0	405 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	PHB2	Q99623	299 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	ZNF2	Q9BSG1	426 aa	Predicted RBP	4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	PLEKHA2	Q9HB19	425 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	SLC2A9	Q9NRM0	540 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	ZNF355P	Q9NSJ1	428 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	COMMD3	Q9UBI1	195 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	MLX	Q9UH92	298 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	MRPS7	Q9Y2R9	242 aa	Known RBP	4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	NSG2	Q9Y328	171 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	SMAD5-AS1	Q9Y6J3	95 aa		4.84	□□□□□ -1.63
TCF4-233	ENST00000566376	HECTD4	Q9Y4D8	3996 aa		4.84	□□□□□ -1.64
TCF4-233	ENST00000566376	C13orf42	A0A1B0GVH6	325 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	RBMY1B	A6NDE4	496 aa	Known RBP	4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	RBMY1E	A6NEQ0	496 aa	Known RBP	4.83	□□□□□ -1.64
TCF4-233	ENST00000566376		K7EIM0	57 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	SLC22A5	O76082	557 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	HPRT1	P00492	218 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	IGKV1-5	P01602	117 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	RBMY1D	P0C7P1	496 aa	Known RBP	4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	ZP3	P21754	424 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	F2R	P25116	425 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	HLA-DMA	P28067	261 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	G6PC	P35575	357 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	RANBP1	P43487	201 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	PHLDA2	Q53GA4	152 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	FAAP20	Q6NZ36	180 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	SNX29P2	Q8IUI4	249 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	TMEM61	Q8N0U2	210 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	NECAP1	Q8NC96	275 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	OR52I2	Q8NH67	350 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	LHFPL5	Q8TAF8	219 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	SEC22A	Q96IW7	307 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	USMG5	Q96IX5	58 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	SPIN2A	Q99865	258 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	SPIN2B	Q9BPZ2	258 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	DIABLO	Q9NR28	239 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	NDUFA4L2	Q9NRX3	87 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	COMMD9	Q9P000	198 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	KLK11	Q9UBX7	282 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376	PRELID3B	Q9Y3B1	194 aa		4.83	□□□□□ -1.64
TCF4-233	ENST00000566376		A0A0G2JLM5	398 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	TEX50	A0A1B0GTY4	177 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	C15orf61	A6NNL5	157 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	LGALS9	O00182	355 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	CTDSP2	O14595	271 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	OR2C1	O95371	312 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	FGF2	P09038	288 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	NPS	P0C0P6	89 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	C8orf88	P0DMB2	117 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	NQO2	P16083	231 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	MAS1L	P35410	378 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	KIR2DS2	P43631	304 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	CBX5	P45973	191 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	DEFB114	Q30KQ6	69 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	GPR107	Q5VW38	600 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	CLEC19A	Q6UXS0	136 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	CROCCP3	Q8IVE0	287 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	GDPD1	Q8N9F7	314 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	VSTM2A	Q8TAG5	236 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	DYNC2LI1	Q8TCX1	351 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	S100A16	Q96FQ6	103 aa	Known RBP	4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	CMTM3	Q96MX0	182 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	TP53RK	Q96S44	253 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	DCUN1D5	Q9BTE7	237 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	CHRDL1	Q9BU40	450 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	ZNF436	Q9C0F3	470 aa	Predicted RBP	4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	PLEKHA3	Q9HB20	300 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	IFT46	Q9NQC8	304 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	TMEM14B	Q9NUH8	114 aa		4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	MRPL36	Q9P0J6	103 aa	Known RBP	4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	DYNC1H1	Q14204	4646 aa	Known RBP	4.82	□□□□□ -1.64
TCF4-233	ENST00000566376	PKD1	P98161	4303 aa		4.81	□□□□□ -1.64
TCF4-233	ENST00000566376	DNAH11	Q96DT5	4516 aa		4.81	□□□□□ -1.64
TCF4-233	ENST00000566376	PKHD1	P08F94	4074 aa		4.81	□□□□□ -1.64
TCF4-233	ENST00000566376	IGHV3-21	A0A0B4J1V1	117 aa		4.81	□□□□□ -1.64
TCF4-233	ENST00000566376	IGHV3-35	A0A0C4DH35	117 aa		4.81	□□□□□ -1.64
TCF4-233	ENST00000566376	GPR31	O00270	319 aa		4.81	□□□□□ -1.64
TCF4-233	ENST00000566376	HRAS	P01112	189 aa		4.81	□□□□□ -1.64
TCF4-233	ENST00000566376	CD74	P04233	296 aa		4.81	□□□□□ -1.64
TCF4-233	ENST00000566376	CD3D	P04234	171 aa		4.81	□□□□□ -1.64
TCF4-233	ENST00000566376	SERPINE2	P07093	398 aa		4.81	□□□□□ -1.64
TCF4-233	ENST00000566376	NHLRC4	P0CG21	123 aa	Predicted RBP	4.81	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms